Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., transporter substrate-binding domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  139 bits (349), Expect = 9e-38
 Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 6/225 (2%)

Query: 23  IKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAKCSFHNQAFDSLIPALKFKRYD 82
           I+F+ E  Y PF +   +    GF+VDLA ALC +++  C+   + F++L+ AL   R D
Sbjct: 77  IRFLTEIDYPPFNFTGADGNPAGFNVDLARALCDEIKITCTVQMRKFETLLDALASNRGD 136

Query: 83  AAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGKVADQAA---LKGKRVGVQNGSTHQS 139
           A I+++ +T     +++F++PYY   A FV+    V  +     L+G++VG   GS H++
Sbjct: 137 AIIASLAVTPQTRTKLDFTDPYYRTPARFVARKDAVMPEMRPEFLEGRKVGAVAGSAHEA 196

Query: 140 FLLEQLSDVVAVPYSSYQDAFIDMKNGRIDSVFGDTAVVAEWFKG---DNNLAYVGERVT 196
           +L    +D     Y + +     +K G +D +FGD   +A W  G   +N  A+ G    
Sbjct: 197 YLKAMFTDAELHSYPNAEALRAALKRGEVDFIFGDAISLAFWINGTDSENCCAFSGAPFL 256

Query: 197 NAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAAIFNKYF 241
            ++YFG G GIAV K N  L   LN AL  V E G+Y  ++ +YF
Sbjct: 257 ESRYFGEGVGIAVRKGNDTLRQALNWALFRVWEKGQYTDLWLRYF 301