Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., Arginine ABC transporter, permease protein ArtQ from Pseudomonas fluorescens FW300-N2E2

 Score =  154 bits (388), Expect = 2e-42
 Identities = 82/218 (37%), Positives = 140/218 (64%), Gaps = 6/218 (2%)

Query: 3   LTGYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPE 62
           L G+  +L   + MT+++AL +L +GL+L L+ A  + +  K ++W      T++RG+PE
Sbjct: 5   LYGFGPALAAGALMTVKLALTALCLGLVLGLLGALAKTSPYKPLQWLGGTYSTLVRGIPE 64

Query: 63  LLVVLFIYFGSTQVLFFITGEF-----IEISPFISGVIALSLIFASYASQTLRGALKAVG 117
           LL VL IYFG+  +L  + GE+     + +  F +GVIAL L F +YA++  RGA+ A+ 
Sbjct: 65  LLWVLLIYFGTVNLLRAL-GEYFGNPDLTLDAFAAGVIALGLCFGAYATEVFRGAILAIP 123

Query: 118 RGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQA 177
           +G REA  ALG+     F R+++PQ  R ALPGL N +++L+KDTALVS+IG+ ++++ A
Sbjct: 124 KGHREAGVALGLSKWRIFTRLIMPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIMRHA 183

Query: 178 QLTSAATHEAFTWYATAAVVYLVITLITQRVVKVIDNK 215
           ++    + + FT+Y  AA +YL +T++    + +++ +
Sbjct: 184 EIGVTVSKQPFTFYMVAAFMYLGLTVLAMIGMHLLERR 221