Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., ABC transporter permease from Pseudomonas fluorescens FW300-N2C3

 Score =  124 bits (310), Expect = 2e-33
 Identities = 67/206 (32%), Positives = 116/206 (56%), Gaps = 5/206 (2%)

Query: 5   GYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELL 64
           G+ L L+ A+ +TL  A++   +G LL ++ A  ++++ + ++   T   TV RG+PE+L
Sbjct: 15  GWGLPLLTAASITLAAAVSGFALGSLLGVIGAALKLSRSRTLRAAGTFYTTVFRGIPEIL 74

Query: 65  VVLFIYFGSTQVLFFITGE-----FIEISPFISGVIALSLIFASYASQTLRGALKAVGRG 119
           +V   YFG +     +        F  +  F  GV+A+ ++  +Y ++  R     + RG
Sbjct: 75  IVYLFYFGGSVAFTKVMNMSGFPGFFSLPAFAIGVLAVGIVSGAYQTEAYRAGFLRLDRG 134

Query: 120 QREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQL 179
           Q EA  + G+       RI+ PQA+R ALP L N W  +LK+TAL+S+IG+T+LL+Q+  
Sbjct: 135 QIEAGLSCGMSDFLLLRRIIAPQALRFALPALGNVWQSVLKETALLSVIGLTELLRQSIT 194

Query: 180 TSAATHEAFTWYATAAVVYLVITLIT 205
            + +T E   +Y  AA ++ +I  +T
Sbjct: 195 AAGSTREPLLFYGVAAAMFFIIGRLT 220