Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., Arginine ABC transporter, permease protein ArtQ from Pseudomonas fluorescens FW300-N1B4

 Score =  157 bits (396), Expect = 2e-43
 Identities = 83/207 (40%), Positives = 137/207 (66%), Gaps = 6/207 (2%)

Query: 3   LTGYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPE 62
           L G+  +L   + MT+++AL++L +GL+L L+ A  + +  K ++W      T++RG+PE
Sbjct: 5   LYGFGPALAAGALMTVKLALSALCLGLVLGLLGALAKTSPYKPLQWLGGTYSTLVRGIPE 64

Query: 63  LLVVLFIYFGSTQVLFFITGEF-----IEISPFISGVIALSLIFASYASQTLRGALKAVG 117
           LL VL IYFG+  ++  + GEF     +E++ F +GVIAL L F +YA++  RGA+ A+ 
Sbjct: 65  LLWVLLIYFGTVNLMRAL-GEFFGNPDLELNAFAAGVIALGLCFGAYATEVFRGAILAIP 123

Query: 118 RGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQA 177
           +G REA  ALG+     F R+++PQ  R ALPGL N +++L+KDTALVS+IG+ ++++  
Sbjct: 124 KGHREAGVALGLSKFRIFTRLIMPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIMRHT 183

Query: 178 QLTSAATHEAFTWYATAAVVYLVITLI 204
           Q+    + + FT+Y  AA +YL +T++
Sbjct: 184 QIGVTISKQPFTFYMVAAFMYLGLTIL 210