Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., amino acid ABC transporter membrane protein 1, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score =  159 bits (403), Expect = 3e-44
 Identities = 86/219 (39%), Positives = 141/219 (64%), Gaps = 4/219 (1%)

Query: 3   LTGYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPE 62
           L G+  +L   + MT+Q+AL++L +GL+L L+ A  + +  K ++W  +   T++RG+PE
Sbjct: 5   LHGFGPALAAGALMTVQLALSALCLGLVLGLLGALAKTSPYKPLQWLGSTYSTLVRGIPE 64

Query: 63  LLVVLFIYFGSTQVLFFITGEF----IEISPFISGVIALSLIFASYASQTLRGALKAVGR 118
           LL VL IYFG+   +  +   F    + +S F +GVIAL + F +YA++  RGA+ A+ +
Sbjct: 65  LLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAGVIALGICFGAYATEVFRGAILAIPK 124

Query: 119 GQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQ 178
           G REA  ALG+  S    ++VLPQ  R ALPGL N +++L+KDTALVS+IG+ ++++ AQ
Sbjct: 125 GHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQ 184

Query: 179 LTSAATHEAFTWYATAAVVYLVITLITQRVVKVIDNKFS 217
           +    T +AFT+Y  AA +YL +T++    +  ++ + S
Sbjct: 185 IAVGFTKQAFTFYMVAAFMYLGLTVLAMAGMYFLEKRAS 223