Pairwise Alignments

Query, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., L-lysine ABC transporter, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  147 bits (370), Expect = 3e-40
 Identities = 80/215 (37%), Positives = 130/215 (60%), Gaps = 7/215 (3%)

Query: 5   GYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELL 64
           G+   +     +T  +A+A+L VGL++    A  + ++ K ++    +  T+ RGLPELL
Sbjct: 44  GWGDEIAYGFLVTASLAVATLPVGLVIGFFVALAKQSEEKSLRLAGNIYTTIFRGLPELL 103

Query: 65  VVLFIYFGSTQVL---FFITGEF---IEISPFISGVIALSLIFASYASQTLRGALKAVGR 118
            +  +Y+G  Q+L   F  T  +   +EI+ F++G+IAL ++F++Y S+ L  A KA+  
Sbjct: 104 TLFIVYYG-LQILVQQFLATVGYEGAVEINAFVAGMIALGVVFSAYCSEVLLSAFKAIPH 162

Query: 119 GQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQ 178
           GQ EA  ALG+        I+LPQ +R ALPGL N W+ LLKDTALVS+IG+ D+L+Q  
Sbjct: 163 GQYEAGDALGLHRGKTMRLIILPQLIRIALPGLGNLWMALLKDTALVSVIGLPDILRQTG 222

Query: 179 LTSAATHEAFTWYATAAVVYLVITLITQRVVKVID 213
           + +  T  AF ++  A V++LV+ +I+  V   ++
Sbjct: 223 IAARVTKHAFEFFGIACVLFLVLAMISSVVFSALE 257