Pairwise Alignments

Query, 222 a.a., arginine transporter permease subunit ArtM from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  167 bits (424), Expect = 1e-46
 Identities = 89/209 (42%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 9   LLEGLGTSLQLTAASLLVGCILSLLMTVSLVMRTPVVHWFSRAVITLFTGTPLLVQIFLV 68
           L EGL  +L+L   ++ +G  +++   +  V  +P+V  F  A I  F GTPLL+QI LV
Sbjct: 14  LFEGLPVTLKLVTLAVAIGVFIAIPTALLRVHPSPLVRAFPYAFIFFFRGTPLLIQIALV 73

Query: 69  YYGPGQFEWIRES-VLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSGQWQACRA 127
           YYG     WIRE+ VLW  L +P++CA++A ALNT AYS ++ +GA  AIP G+ +A RA
Sbjct: 74  YYGLSTLPWIRENEVLWPILREPFWCALIAFALNTGAYSAEILRGAIQAIPRGEVEAARA 133

Query: 128 LGMNKIATLR-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRINAQTYD 186
            GM  +  +R ++LP A +  +PAY NE+IL+ KG++LAS+IT++D+ G A+ + A+ Y 
Sbjct: 134 YGMRGLLIVRRIILPRAFQIGLPAYGNEIILILKGSALASSITLLDITGVARLLYARYYT 193

Query: 187 TLTVFGIAGAFYLAVNGILTLIFRQIEKK 215
            +  F  AG  YL +  +LT   R IE++
Sbjct: 194 PVEAFVTAGVIYLILVYLLTRGLRLIERR 222