Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 76/288 (26%), Positives = 132/288 (45%), Gaps = 26/288 (9%)

Query: 7   LQTFKTLVDTGHFTKTAEKLFMTQPGVSQHIRKLEEACQHPLIHRINKSFELTDQGRMVY 66
           L+ F+ L   G FT  A++L + QP +SQ I++LEE+    L++R NK +   D  R+  
Sbjct: 6   LRQFEALATKGSFTLAAKQLNLAQPALSQGIKRLEESLGVTLVNR-NKHYRGQDGSRLTL 64

Query: 67  EYATQ-LAKNERRLLEQIHETEPFA--------GRYRIACSGSLSLVIYPP-LLALQQLH 116
               + LA++ R +L+Q+ + E           G  RIA  G L     P  L+A +  +
Sbjct: 65  TAEGEALAQHARLILKQVKQAEAHIKSMANLTKGEVRIAVPGMLGSYYLPSRLMAFRHRY 124

Query: 117 PKLCIELEAAPNHTILKAIKEGDVDVGIVTSQPSQGVFESEVLGEEPLYLVLPHDHPTEP 176
           P L + L        L+ ++  +VD+ I+T Q  Q  F+S +L  E + + +  DHP   
Sbjct: 125 PDLKLSLFEGGTRDSLRMLQNEEVDIAIITGQDLQPNFDSHLLLREQMVVAVGEDHPLAE 184

Query: 177 DQ---LADHLLQLGLIGHPDIDH-YFSLYLAKSTNLTLTVLNSESFPRSGYVNQIQQILL 232
            +   L     Q  ++  P   H  + L  AK+ +L + +        +  +N I+Q+  
Sbjct: 185 HKEITLEQFFEQELVMFKPGYFHREWMLSQAKALDLEVNIAF-----ETNLINLIKQV-- 237

Query: 233 PVAKGLGFTVLPKSAVENFPLREQISVFENPAPVTETLYLVKKRQRDL 280
            VA+G   T + +  +E    R+ I        V   L++   R+R +
Sbjct: 238 -VAQGFAITSVLEMVIE---ARDPIRAIPFSPAVHLDLHIAWNRERPI 281