Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  226 bits (577), Expect = 4e-64
 Identities = 130/295 (44%), Positives = 166/295 (56%), Gaps = 12/295 (4%)

Query: 1   MLNPIWLQTFKTLVDTGHFTKTAEKLFMTQPGVSQHIRKLEEACQHPLIHRINKSFELTD 60
           MLN  WLQTF TL++ GHFT TA+KLFMTQPGVSQHI+KLEE     LI R  K FELT+
Sbjct: 1   MLNQQWLQTFVTLIEVGHFTLTAKKLFMTQPGVSQHIKKLEEQVGVSLILRQGKRFELTE 60

Query: 61  QGRMVYEYATQLAKNERRLLEQIHETEPFAGRYRIACSGSLSLVIYPPLLALQQLHPKLC 120
            G ++Y+YA    + E  LL ++   EP  G  R  CSG+++ ++YP  L  Q  +P L 
Sbjct: 61  AGSILYQYARDYRQAETELLARLQTDEPNIGECRFGCSGAIASLLYPHFLERQIQYPSLN 120

Query: 121 IELEAAPNHTILKAIKEGDVDVGIVTSQPSQGVFESEVLGEEPLYLVLPHDHPTEPDQLA 180
           + LEAAPN  I+  I    +DVGIVT +  +     + +G   L LVLP  + + P    
Sbjct: 121 VMLEAAPNQRIVSGILNNQLDVGIVTKRTDEAELSYQAIGYAELALVLPSQYQSMPLD-R 179

Query: 181 DHLLQLGLIGHPDIDHYFSLYLAKSTNLTLTVLN-----------SESFPRSGYVNQIQQ 229
             L  +G I HPD  +Y    L  +        N           ++  PR GYVNQ+ Q
Sbjct: 180 KRLEHIGFIDHPDGQYYLQQVLRANFGEAEATRNARGSQRHVSGIAQQIPRRGYVNQLNQ 239

Query: 230 ILLPVAKGLGFTVLPKSAVENFPLREQISVFENPAPVTETLYLVKKRQRDLPQRF 284
           ILLPVAKG+GFTVLP + V  F  RE +   E    V E+LYLV K  R LP RF
Sbjct: 240 ILLPVAKGIGFTVLPLTTVNAFIPRESLWAVELEQKVQESLYLVHKNTRPLPSRF 294