Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  137 bits (346), Expect = 5e-37
 Identities = 92/362 (25%), Positives = 165/362 (45%), Gaps = 2/362 (0%)

Query: 20  LYAIAAGYLMSLVPLMLPHYQLESDLASWLASVFYAGLLAGALVAEPFVNRLGHRKAFVW 79
           L  +A G L + + L L   Q+       + S +YAGL+AG+ +    + R+GH +AFV 
Sbjct: 17  LTVLAGGLLTTYLGLKLSAMQVPQIWIGAMMSAYYAGLVAGSKIGHRLIARVGHIRAFVA 76

Query: 80  CLSLLQLSIVVMPLLPYASVWLLARLVAGIAVAGIFVVVESWL-LHGDEQGRAKRLGIYM 138
              ++  S +   L+   S+W++ RL+ G+ +   ++V+ESWL    D   R      YM
Sbjct: 77  SAGIVTASALGHALVDDLSIWIVLRLLVGLGMMCQYMVLESWLNEQADNSQRGTVFASYM 136

Query: 139 VSLYGGTALGQMAIGQLGVAGAVPFIAITTLLLIASIVLMYVDSDQPSTQQASSLSLRQI 198
           +  Y    LGQ AI      G  P + I     +  + +       P+    + L++   
Sbjct: 137 IVSYLALILGQGAISLYPDLGLEPLLLIAICFALCIVPIALTRRIHPAPLVPAPLNVTHF 196

Query: 199 FKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMALVILGGMAVQPLVPWL 258
           FK +  A+    +  + +G+ YGL P   +N G+    + + M   I  G+  Q  +  L
Sbjct: 197 FKKAPQALTTVAIGSMIVGSFYGLAPAYASNLGLDPQQVASFMTATIAAGLLAQWPMGKL 256

Query: 259 SKFLGRTLQMALFC-LLGTAAITLTVFDDSLLVLGVSLFILGMATFALYPIAINLGCDKL 317
           S  + R+  +   C LLG   + + +      V  V  F+ G+  F LYP+A  L   ++
Sbjct: 257 SDRMSRSRLIRTNCLLLGVLTLGIAITPYQPTVALVMTFLFGILGFTLYPLATALANSRV 316

Query: 318 DASYIVSATQVMLLSYSVGSVVGPVLADCFMQDRHGLMAYLFAILLATCLYMLIKSVKTK 377
           + S  V  +  +LL++ +G+ +GP++A   MQ     M Y F       L+  +  +  +
Sbjct: 317 EQSERVGLSATILLTFGLGACIGPLIASTLMQWLGNSMLYGFMSACTLVLFAGLNYINAR 376

Query: 378 RQ 379
           ++
Sbjct: 377 QK 378