Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., major facilitator transporter (RefSeq) from Shewanella loihica PV-4

 Score =  376 bits (965), Expect = e-109
 Identities = 199/368 (54%), Positives = 261/368 (70%), Gaps = 1/368 (0%)

Query: 9   NRIAVPVIALTLYAIAAGYLMSLVPLMLPHYQLESDLASWLASVFYAGLLAGALVAEPFV 68
           N    PVI L+ +A+A+G+LMSL+PL L ++ L  DLA WLAS+FY GLL GAL  E  +
Sbjct: 11  NNPTAPVIGLSFFAVASGFLMSLIPLSLGNFGLSPDLAPWLASIFYLGLLLGALRVERLI 70

Query: 69  NRLGHRKAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAGIAVAGIFVVVESWLLHGDE- 127
            ++GHR+ FV  LSLL  SIV M LLP ASVWL ARL+AG  VAG+FVVVESWLL  D  
Sbjct: 71  AKMGHRRGFVLFLSLLIASIVAMLLLPGASVWLAARLLAGFTVAGVFVVVESWLLMADSV 130

Query: 128 QGRAKRLGIYMVSLYGGTALGQMAIGQLGVAGAVPFIAITTLLLIASIVLMYVDSDQPST 187
           + RA+RLGIYM +LYGG+ALGQ+AIG+LG  G +P++ +  LLL+A +  + + S +P+ 
Sbjct: 131 KARARRLGIYMAALYGGSALGQLAIGELGTQGVLPYLFVIVLLLLAIMAPVLIRSGEPAH 190

Query: 188 QQASSLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMALVILG 247
           Q    LSL++   LS+ A+IGCLVSGL LG IYGLMPV + N+       G LMA +ILG
Sbjct: 191 QAQQRLSLKESANLSRPAIIGCLVSGLLLGPIYGLMPVYIDNQVDEPAQTGLLMAAIILG 250

Query: 248 GMAVQPLVPWLSKFLGRTLQMALFCLLGTAAITLTVFDDSLLVLGVSLFILGMATFALYP 307
           GMAVQPL+ +LS  + + L MA+  L+G   +   +  ++ +  G+S FILG A+FALYP
Sbjct: 251 GMAVQPLISYLSPRMDKRLLMAMCTLVGLVGVIGAIESNAFMFKGLSYFILGAASFALYP 310

Query: 308 IAINLGCDKLDASYIVSATQVMLLSYSVGSVVGPVLADCFMQDRHGLMAYLFAILLATCL 367
           IAI+L CDKL ++ IVSAT+VMLL YS+GSV GP+LA       HG+M YL   LL+TCL
Sbjct: 311 IAISLACDKLPSTKIVSATEVMLLCYSLGSVAGPLLALSLSDKGHGMMIYLAICLLSTCL 370

Query: 368 YMLIKSVK 375
           YML+KS++
Sbjct: 371 YMLLKSLQ 378