Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  134 bits (338), Expect = 4e-36
 Identities = 92/365 (25%), Positives = 170/365 (46%), Gaps = 8/365 (2%)

Query: 20  LYAIAAGYLMSLVPLMLPHYQLESDLASWLASVFYAGLLAGALVAEPFVNRLGHRKAFVW 79
           L  +A G L + + L L    +       + S +Y GL+AG+ +    + ++GH +AFV 
Sbjct: 17  LTVLAGGLLTTYLGLRLSVIHVPQLWIGGMMSAYYVGLVAGSKIGHRLIAQVGHIRAFVA 76

Query: 80  CLSLLQLSIVVMPLLPYASVWLLARLVAGIAVAGIFVVVESWLLHGDEQGRAKRLGI--- 136
              ++    +   L+   +VWLL RL+ G+ +   ++V+ESWL   +EQ  + + G    
Sbjct: 77  SAGIVAACALGHALVDQLAVWLLLRLIVGMGMMCQYMVLESWL---NEQAESSQRGTVFA 133

Query: 137 -YMVSLYGGTALGQMAIGQLGVAGAVPFIAITTLLLIASIVLMYVDSDQPSTQQASSLSL 195
            YM+  Y G  LGQ AI      G  P + I     +  + +       P+    + L +
Sbjct: 134 SYMIVSYFGLILGQGAISLYPELGLEPLLLIAICFALCIVPISLTRRIHPAPLVPAPLKI 193

Query: 196 RQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMALVILGGMAVQPLV 255
              ++ +  A+    +  + +G+ YGL P   +N G+    +   M   IL G+  Q  +
Sbjct: 194 AHYWQKAPQALTTIAIGSMIVGSFYGLAPAYASNLGLPPEKVATYMTATILAGLLAQWPM 253

Query: 256 PWLSKFLGRTLQMALFC-LLGTAAITLTVFDDSLLVLGVSLFILGMATFALYPIAINLGC 314
             LS  + R+  + + C LLG  A+ + +      V  V  F+ G+  F  YP+A  L  
Sbjct: 254 GKLSDIMSRSRLIRINCVLLGILALGIALTPYHPTVSLVMTFLFGILGFTFYPLATALAN 313

Query: 315 DKLDASYIVSATQVMLLSYSVGSVVGPVLADCFMQDRHGLMAYLFAILLATCLYMLIKSV 374
            +++ S  V  +  +LL++ +G+ +GP++A   MQ     M Y F       L++ ++ V
Sbjct: 314 SRVEQSERVGLSATILLTFGMGASIGPLIASTLMQWFGNSMLYGFMSACTVILFLRLRYV 373

Query: 375 KTKRQ 379
            ++++
Sbjct: 374 HSQQK 378