Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., major facilitator family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  358 bits (919), Expect = e-103
 Identities = 191/358 (53%), Positives = 247/358 (68%), Gaps = 2/358 (0%)

Query: 13  VPVIALTLYAIAAGYLMSLVPLMLPHYQLESDLASWLASVFYAGLLAGALVAEPFVNRLG 72
           VPV  L+L+A+A+GYLMSL+PL L ++ L  DLA WLAS+FY GLL GA    P V+R+G
Sbjct: 14  VPVAGLSLFALASGYLMSLIPLSLTYFDLSLDLAPWLASIFYLGLLLGAPCIAPIVSRIG 73

Query: 73  HRKAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAGIAVAGIFVVVESWLLHGDEQ-GRA 131
           H KAF+  L++L  S+VVM LLP  S+WL +RL+AG+AVAGIFVVVESWLL  D Q  RA
Sbjct: 74  HSKAFILFLNILLCSVVVMVLLPQTSIWLASRLIAGLAVAGIFVVVESWLLMADTQKQRA 133

Query: 132 KRLGIYMVSLYGGTALGQMAIGQLGVAGAVPFIAITTLLLIASIVLMYVDSDQPSTQQAS 191
           KRLG+YM +LYGGTA+GQ+A+  LG  G +P++ +  LL  AS+  + V   QP + +  
Sbjct: 134 KRLGLYMTALYGGTAIGQLAVDYLGTTGNLPYLVVIGLLAAASLPALLVKRGQPQSSEQH 193

Query: 192 SLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDLGNLMALVILGGMAV 251
           S++L  +  LSK A+ GCLVSGL LG IYGL+P+ ++         G  MAL+ILGGM V
Sbjct: 194 SIALSDLKTLSKPAIAGCLVSGLLLGPIYGLLPIYVSQDMGFAQQTGQFMALIILGGMIV 253

Query: 252 QPLVPWLSKFLGRTLQMALFCLLGTAAITLTVFDDSLLVLGVSLFILGMATFALYPIAIN 311
           QPLV +LS  + +++ M  FCL+G AA+ L +   SL+ L +   +LG   FALYPIAI+
Sbjct: 254 QPLVSYLSPRIQKSVLMIAFCLVGAAAL-LLLMQTSLVGLWLGFVLLGACAFALYPIAIS 312

Query: 312 LGCDKLDASYIVSATQVMLLSYSVGSVVGPVLADCFMQDRHGLMAYLFAILLATCLYM 369
           L CD L +S IVSATQ+MLLSYSVGSV+GPV A  F    HGL  YL A  L T  Y+
Sbjct: 313 LACDHLPSSQIVSATQIMLLSYSVGSVIGPVAASRFDDIEHGLPLYLAASFLMTACYL 370