Pairwise Alignments

Query, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., inner membrane transport protein YdhC (RefSeq) from Shewanella sp. ANA-3

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 72/344 (20%), Positives = 145/344 (42%), Gaps = 22/344 (6%)

Query: 53  FYAGLLAGALVAEPFVNRLGHRKAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAGIAVA 112
           F AGL  G L+  P V++LG R A +  L +  L+ V +       +  +AR    +   
Sbjct: 59  FLAGLALGQLIYGPLVSKLGKRYALILGLGIFALASVAIANSDSILMLNIARFFQAVGAC 118

Query: 113 GIFVVVESWLLHGDEQGRAKRLGIY-----MVSLYGGTA--LGQMAIGQLGVAGAVPFIA 165
              V+ ++ ++  ++    K  GI+     +V+L    A  LG   +   G       + 
Sbjct: 119 SAGVIWQAIVV--EQYDAEKAQGIFSNIMPLVALSPALAPILGAYILNDFGWRAIFISLC 176

Query: 166 ITTLLLIASIVLMYVDSDQPSTQQASSLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLM-- 223
           +   LL+   +       +    + S++S  QI K ++  +   ++ G   GA +  +  
Sbjct: 177 VIAFLLVLMTLYFVPSHAEHQDTRPSAVSYGQILKNTR-YLGNVVIFGACSGAFFAYLTV 235

Query: 224 -PVELANRGISHTDLG----NLMALVILGGMAVQPLVPWLSKFLGRTLQMALF--CLLGT 276
            P+ +   G   T++G        + I+GG A + L+  +       + +A+F  C++  
Sbjct: 236 WPIVMEQHGYQATEIGLSFIPQTIMFIVGGYASKLLIKRIGADRTLNVLLAIFGLCVISI 295

Query: 277 AAITLTVFDDSLLVLGVSLFILGMATFALYPIAINLGCDKLDASYIVSATQVMLLSYSVG 336
              TL +  +++  L +S  IL  A  A+YPI +N    +   +   +A     L  ++ 
Sbjct: 296 VFFTLLMKAETIFPLLISFSILAAANGAIYPIVVNSALQQFTQNAAKAAGLQNFLQITIA 355

Query: 337 SVVGPVLADCFMQDRHGLMAYLFAILLATCLYMLIKSVKTKRQW 380
                ++A   +    G +A  + IL  + + +L   +KT++ W
Sbjct: 356 FGASSLVA---LWASSGEVAIGWGILSCSLVVILGYLLKTEQTW 396