Pairwise Alignments

Query, 362 a.a., 3-oxoacyl-ACP synthase III from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

 Score = 60.1 bits (144), Expect = 9e-14
 Identities = 71/332 (21%), Positives = 137/332 (41%), Gaps = 31/332 (9%)

Query: 8   ITGWGKCLPPATLSNHDLSTFLDTSDEWIQSRTGIEQRRIS--HVNTSDLATVAAQHAIA 65
           I G+G  LP   +   D++       + I+    + ++ +     +T+ +A  +A+ A++
Sbjct: 6   IVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSARRALS 65

Query: 66  CAGVSVEEIDLIIVATCSPDSLIPNIASRVQQNLGI-PSAAAFDLNAACTGFLYGLETAT 124
            AG++ ++I  + V + S    +   +  V +  G+ P   A DL  AC     G++   
Sbjct: 66  RAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGIQMCM 125

Query: 125 RLMQASHYRHALVIGAERLSFYLDWTKRDTAVLFGDGAGAVVLSKTEQKVGLQDAQIGC- 183
            L+ +    +A+ +GA+            TA     GA  ++ +K E+ +   +      
Sbjct: 126 GLVGSEMMEYAMAVGADTAQGAPGDALEYTAA--AGGAAFIIGAKKEEFIAKFNGTYSYT 183

Query: 184 ----DAQGRDILAVPKFGTAMDRFDADNGYWAFDFVGKEIFKRAVRGMGAAAQQVLARSG 239
               D   R+    PK G    RF  +  Y          FK  + G    A+ ++ + G
Sbjct: 184 TDTPDFWRREHEHYPKHG---GRFTGEPAY----------FKHVLNG----AKGMMEKMG 226

Query: 240 LSTEEIDVVIPHQANIRIIQTLCDLAGIAQD--KAFVNIHRYGNTSAATVPIALCEALEQ 297
            ++++ D  + HQ N +   T     G  ++  K  +     GNT +  VP+ L   L+ 
Sbjct: 227 TTSKDYDYCVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLSNILDH 286

Query: 298 GKIKPHDDLLVAAFGAGLTWGAGHIRWGERIT 329
              K  D + V ++G+G    A  I   +RI+
Sbjct: 287 A--KADDRIFVVSYGSGAGSDAFDITVTDRIS 316