Pairwise Alignments

Query, 364 a.a., autoinducer 2-binding periplasmic protein LuxP from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., D-ribose ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 1/132 (0%)

Query: 214 RGDTFIQDMNAVHHFPLASSYYTKATEQSGYEATLNIVKNNPEIGFIYACATDVALGAAQ 273
           RG+ F Q + A H F + +S         G     N++  +P++  ++A   ++ALGA +
Sbjct: 166 RGEGFQQAV-AAHKFNVLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALR 224

Query: 274 ALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAEAIKWDLEGKSVPL 333
           AL+   + D++V G+ G     +A+  G+L  T+ ++ +  GV   E     L+G+ V  
Sbjct: 225 ALQTAGKSDVMVVGFDGTPDGEKAVNSGKLAATIAQLPEQIGVKGVETADKVLKGEKVET 284

Query: 334 VYSGDFEVVTKQ 345
            Y  + ++V KQ
Sbjct: 285 SYPLELKLVIKQ 296