Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1364 a.a., Two-component system sensor protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  215 bits (547), Expect = 2e-59
 Identities = 169/563 (30%), Positives = 274/563 (48%), Gaps = 40/563 (7%)

Query: 309  REIETLMNYTHKLMDLDTKSEFI----GSKIYEFDYFGRTL--EQSFRRLANKEKQFEDL 362
            R+I   +    +++DL+   E       S++ +F    R +     +  +A     F  +
Sbjct: 458  RDISERVRSHQRIVDLNASLEHQVAERTSELVQFSVLQRAILAHAGYAIIATDSSGFVTM 517

Query: 363  FNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFLFEILERQLLPT---------IT 413
            FN A    + ++    + R   S   QF+  D        + E+   P          +T
Sbjct: 518  FNPAAEKLLGYSADDVIGRRKAS---QFIEADELQERALRLAEQTGTPVAGTLEAVAALT 574

Query: 414  NAAQGNNPSDVTTEVDGR--VYRWNLSPIMVEG-QIISIITQGQDITTIAEAEKQSQAAR 470
            +  + +         DGR       LS +  +  Q+I  +    D+T     EKQ + A 
Sbjct: 575  SLGRSDTSEWTYVSQDGRRLPVLLTLSTLRDDNDQVIGYLGVAVDLTEQKLHEKQLRLAM 634

Query: 471  REAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLA 530
              A  + + +++FLA MSHE+RTP+N +LG+  LL+R+ L    ++ V  +  S   LL 
Sbjct: 635  DAARSANQSKSDFLANMSHEIRTPMNAILGMLYLLQRSELPGAAQDMVTKIDRSARSLLE 694

Query: 531  VLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVR 590
            ++NDILDFS++E G+  +++  F L +L   I  + R   + K +E++V         + 
Sbjct: 695  IINDILDFSKIEAGRIDLERAPFDLNQLFDNIADLMRSSLSAKPVEMIVEPLPRECRWLL 754

Query: 591  SDQIRINQILFNLLNNAIKFTHQGSIRVELQLI-EGDP-LAQLVIQVVDTGIGIREQDLT 648
             D +RINQ+L NL+ NAIKFT QG + + ++    GDP   +L+  V DTGIGI ++  +
Sbjct: 755  GDALRINQVLVNLVGNAIKFTEQGEVVLSVRRFPSGDPNKIKLLFSVRDTGIGISKEKQS 814

Query: 649  VIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVE 708
            +IF PF+QA+++T+R YGGSGLGLTI   L+E++ G L V S  G G+ F   + +E  +
Sbjct: 815  LIFSPFLQADTSTSRRYGGSGLGLTISRRLIELMGGALEVESVPGRGSEFYFVITLERTD 874

Query: 709  KPDAPQQ--LLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDG---L 763
             P A Q+  LLP P+  P      RVL+ +D+            + G  V  V  G   +
Sbjct: 875  PPKAQQEAALLP-PESMP------RVLIADDHDAALNNLVRIATELGWRVDAVASGQAAM 927

Query: 764  QAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVL---HLPVVVYACTADGLEETRQAF 820
            QAIE+     YD+ L+D ++P +DGV   R ++        PV+V   TA       Q  
Sbjct: 928  QAIED-ATEPYDIFLLDWRMPDIDGVAIARQVRARATPGRHPVIVMV-TAYERRLLEQHP 985

Query: 821  FHAGAEYVLVKPLKEQTLHKALE 843
                 + V+ KP+    LH+ +E
Sbjct: 986  EQQDLDAVMTKPVTSAALHRLVE 1008



 Score = 61.6 bits (148), Expect = 3e-13
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 3/118 (2%)

Query: 731  RVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHD--YDLVLMDNQLPYLDG 788
            ++LLV+D+  N  +AQ      G  V+   DG QA+  LK     + LVLMD Q+P +DG
Sbjct: 1033 QLLLVDDSEINCEVAQRILEGEGAMVTVAHDGEQAVNTLKRAPDLFHLVLMDVQMPVVDG 1092

Query: 789  VETTRTIKKVLHL-PVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHF 845
             E TR ++++  L  + V A TA      ++    AG    + KP   + L  A+ HF
Sbjct: 1093 YEATRRLRQIPSLASLPVIALTAGAFRPQQEKALEAGMNGFIAKPFNVEELVTAIRHF 1150