Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1287 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  219 bits (559), Expect = 6e-61
 Identities = 136/411 (33%), Positives = 226/411 (54%), Gaps = 20/411 (4%)

Query: 455 DITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQ 514
           D+T   + E++   AR +A +++R +++FLA MSHE+RTP+N VLG+ Q+  +T L    
Sbjct: 512 DLTEQLKREQELADAREQALQASRAKSDFLANMSHEIRTPMNAVLGLLQMTLQTELPPRP 571

Query: 515 REHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKG 574
           R+++     + + LLA+LNDILDFS++E G+  +++  F L++L+  +  I      +K 
Sbjct: 572 RDYLEKTQQAAKSLLALLNDILDFSKIEAGRIELERQGFSLQQLLGDMGSILSSQVQQKD 631

Query: 575 LELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDP-LAQLVI 633
           +ELV     +    +  D +R+ QIL N+L NAIKFT +G I   +    GD     L I
Sbjct: 632 IELVYQVAPSVPDQLIGDSLRLRQILLNVLTNAIKFTEKGDIITRIDADLGDDGTCHLHI 691

Query: 634 QVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYG 693
           ++ D+GIG+  +   +IF+ F QA+S+ +R YGG+GLGL I   LV ++ G++ V+S  G
Sbjct: 692 EIQDSGIGMTNEQQAIIFKGFSQADSSISRRYGGTGLGLAITRELVHLMQGEIRVTSSPG 751

Query: 694 IGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYG 753
           +G+ F I + +      DA +       P   F   +RVLLVEDNHT+  +     R  G
Sbjct: 752 VGSTFTIDVQLGF----DATKY-----RPGARF-SGVRVLLVEDNHTSRLVFSELLRDLG 801

Query: 754 LDVSWVTDGLQA---IEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLHLP----VVVY 806
            +V+ + +GL A   IE +    +D++L D QLP LDG+E    I+ +  L     +++ 
Sbjct: 802 CEVTALNNGLTAMKTIERMAPDSFDVLLADWQLPGLDGLELASWIRHLDSLSRQPGIIIV 861

Query: 807 ACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKHHHGQKNAGLN 857
              +  + E +        +  L+KP+  + + + L+     H   N GL+
Sbjct: 862 TAFSQAMLEAQLKHREEEFDATLIKPVTREMVSRCLQSVLERH--NNDGLD 910



 Score = 75.1 bits (183), Expect = 2e-17
 Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 2/116 (1%)

Query: 731  RVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVE 790
            R+LLVEDN TN  +A +   + G +V    DG QA++ L    +DLVLMD Q+P +DG +
Sbjct: 925  RLLLVEDNATNRLVATSLLGQLGAEVIEAVDGFQALKLLSRQQFDLVLMDIQMPGMDGYQ 984

Query: 791  TTRTIKKVLHL-PVVVYACTADGLEETRQAFFHAGAEYVLVKPLK-EQTLHKALEH 844
            TTR I+  L L  + + A TA+ + E +QA   AG    + KP + ++   K L++
Sbjct: 985  TTRKIRNELMLTDLPIIAMTANAMPEDKQACRDAGMNCHISKPFEIDEVATKLLQY 1040