Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1021 a.a., signal transduction histidine kinase-like protein protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  198 bits (503), Expect = 2e-54
 Identities = 118/318 (37%), Positives = 185/318 (58%), Gaps = 17/318 (5%)

Query: 404 LERQLLPTITNAAQGNNPSDVTTEVDGRVYRWNLSP-IMVEGQIISIITQGQDITTIAEA 462
           +E  ++P    A QGN       E D + ++    P +  +G+++      +D+T I   
Sbjct: 307 VEELIVPYQLRALQGNQQV-FDAEFDDKYFQATYVPDVTNDGEVVGFFACVEDLTPIKAN 365

Query: 463 EKQSQA--------------ARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRT 508
           E++ ++              AR +AE ++R++A+FLA MSHE+RTP+NGVLG+  LL++T
Sbjct: 366 ERKIESYALELEHKNADLVEAREKAEAASRIKADFLACMSHEIRTPMNGVLGILSLLEKT 425

Query: 509 PLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRP 568
            L+ +Q+ ++ V  +S E LL +LNDILDFS++E GKF I +  F L +L+    + +  
Sbjct: 426 ELSIQQKHYLDVASTSAESLLTLLNDILDFSKIESGKFEIDEVPFDLIQLLDDFIQPFAI 485

Query: 569 LCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPL 628
               KGL+L+++ +      VR D  RI Q+L NL++NAIKFT  G I V +Q  E    
Sbjct: 486 RAEAKGLKLLLDISGIHLRWVRGDPGRIRQVLVNLVSNAIKFTEVGWIAVRVQASEDTAN 545

Query: 629 -AQLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLH 687
              L++ + DTGIGI +    V+F PF QA+STTTR +GG+GLGL+I   L E++ G + 
Sbjct: 546 GVSLMVSIEDTGIGISKDKQEVLFSPFTQADSTTTRHFGGTGLGLSIAKRLCELMDGDIR 605

Query: 688 VSSEYGIGTRFEIQLPIE 705
           V S    G+ F+  L ++
Sbjct: 606 VISAEDAGSTFKFHLRLK 623



 Score = 81.3 bits (199), Expect = 3e-19
 Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 704 IELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLD-VSWVTDG 762
           ++++   D    +LP  D Q   + + ++LLVEDN  N  +A    R  GL  V  VT+G
Sbjct: 748 VDILSDSDGNDVVLP-DDTQSQLNDSAQILLVEDNKVNQMVALGMLRNLGLKHVEVVTNG 806

Query: 763 LQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKK----VLHLPVVVYACTADGLEETRQ 818
           LQA+  L+   YDL+LMD  +P +DG + T+ I+K      H  + + A TA+ ++  R+
Sbjct: 807 LQALAALQHRQYDLILMDCLMPEMDGYQATQAIRKGEAGQKHKDIKIVAMTANAMKGDRE 866

Query: 819 AFFHAGAEYVLVKPLKEQTLHKALEHF 845
               AG    + KPL +  + + LE +
Sbjct: 867 TCLEAGMNDYIAKPLHQAEVARVLERY 893