Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1768 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  214 bits (544), Expect = 5e-59
 Identities = 149/494 (30%), Positives = 262/494 (53%), Gaps = 31/494 (6%)

Query: 346  EQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNP--SAQIQFLREDAQNHFLFEI 403
            +Q  R LA +E  F  LF+ A    +  +  G ++  N   S  +Q   E  +    F+ 
Sbjct: 893  KQMDRELAKREAHFRALFDNAGIGIVNVDDRGVILDCNEQFSQYLQLPIERLKGSLFFDY 952

Query: 404  LERQLLPTITNAAQ---GNNPSDVTTEV----DGRVYRW---NLSPIM-VEGQIISIITQ 452
             + +      N+ +   G+    V  E+         RW   N++ +   +G+  S +  
Sbjct: 953  QDPEQGLEAKNSFKHLMGDGADSVKLEIRLLNQAGEARWMDVNMTGLSDKQGEYRSAVLS 1012

Query: 453  GQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLND 512
              DI+++    ++   A+  A+ +++ +++FLA MSHE+RTP+N ++G+SQL  +T L+ 
Sbjct: 1013 MADISSLKLLSEELTQAKDVADAASKAKSDFLANMSHEIRTPMNAIIGMSQLCLQTSLDK 1072

Query: 513  EQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNE 572
            +Q+ +V  +  + + LL ++NDILDFS++E GK  I+   F+L  ++  +  ++     +
Sbjct: 1073 KQQNYVEKIDRASKSLLGIINDILDFSKIEAGKLDIEAVPFQLDTMLEDLSDMFSVKAAD 1132

Query: 573  KGLELV--VNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVEL-QLIEGDPLA 629
            K LEL+  V  NI    +   D +R++Q+L NL+NNAIKFT QG + + + QL+  D   
Sbjct: 1133 KQLELLFAVAPNIPRHLV--GDPLRLSQVLINLMNNAIKFTEQGEVMLSISQLVREDEEI 1190

Query: 630  QLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVS 689
             L   V D GIG+ E+    +F+ F QA+S+TTR+YGG+GLGL I   LVE++ G++ V 
Sbjct: 1191 LLKFSVRDNGIGLTEEQRGKLFQSFSQADSSTTRKYGGTGLGLAICKQLVELMGGEIGVE 1250

Query: 690  SEYGIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFC 749
            S++G G+ F   +  ++     A  QL+          + +R+L+ +DN T   I ++  
Sbjct: 1251 SQFGNGSTFFFSVRFKV-----ADNQLIKVAQEL----EGMRILVADDNATARDILRSTL 1301

Query: 750  RKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLHLP--VVVYA 807
               G  V  V  G +A+   +  DY + L+D ++P +DG+ET R +      P   ++ +
Sbjct: 1302 ESMGFTVDTVRSGAEALSRCQETDYGVALIDWRMPEMDGLETARRLLSERTNPPKTLIVS 1361

Query: 808  CTADG--LEETRQA 819
              ADG  +++  QA
Sbjct: 1362 AHADGDFIDKAEQA 1375



 Score = 72.8 bits (177), Expect = 2e-16
 Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 728  KTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLD 787
            K  R+LLVEDN  N  +A  F  + G+ +S   +G  A+E+L +  +DLVLMD Q+P +D
Sbjct: 1422 KGKRILLVEDNEMNQEVASEFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMD 1481

Query: 788  GVETTRTIKK---VLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKAL 842
            G + T  ++K   +  LPV+  A TA+ +   ++    AG    + KP++   L+K L
Sbjct: 1482 GYQATAELRKRPELADLPVI--AMTANAMAGDKEMCLRAGMNDHIAKPIEVSLLYKTL 1537