Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1047 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  229 bits (585), Expect = 5e-64
 Identities = 152/433 (35%), Positives = 226/433 (52%), Gaps = 33/433 (7%)

Query: 429 DGRVYRWNLSPIMVEGQIISI------ITQGQDITTIAEAEKQSQAARREAEESARVRAE 482
           DGRV   +  PI +  Q+         +   +DIT    AE + Q A+  AE + R + E
Sbjct: 479 DGRVLERDYIPIYLFPQVAQPEDYRGHLWLFRDITERKHAELELQQAKEAAESANRAKGE 538

Query: 483 FLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLE 542
           FLA MSHE+RTP+NG+LG++ L   + L  EQR+++ ++ SS + LL ++NDILDFS++E
Sbjct: 539 FLANMSHEIRTPMNGILGMTDLALDSALTPEQRDYLEMVKSSADALLVIINDILDFSKIE 598

Query: 543 QGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFN 602
            GK  ++   F L++L+    +       ++ L L        A     D  R+ Q+L N
Sbjct: 599 AGKLELEHIHFHLRQLLRETLKPLELRARQRSLTLRCEVPEEVADGYLGDPGRLRQVLIN 658

Query: 603 LLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGIGIREQDLTVIFEPFMQAESTTT 662
           L+ NAIKFT +G + V ++  +G     L   V DTGIGI      +IFE F QA+S+ T
Sbjct: 659 LVGNAIKFTEEGQVAVRVEARDG----LLHFAVSDTGIGIPADKQQLIFEAFSQADSSVT 714

Query: 663 REYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKP------DAPQQL 716
           R +GG+GLGLTI   LV ++ G + V S+ G G+ F     +E V  P      DA +  
Sbjct: 715 RRFGGTGLGLTICTRLVRLMGGHMWVESDPGQGSTFHFTARLEAVAGPAESGEADAGRGE 774

Query: 717 LPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDL 776
           +  P         LR+L+ EDN  N  +     +K G  V+   +G QA+  L    +DL
Sbjct: 775 VVLP--------PLRLLVAEDNPVNQKLVLTLLQKRGHRVTLADNGQQALAALATDHFDL 826

Query: 777 VLMDNQLPYLDGVETTRTIKKV-------LHLPVVVYACTADGLEETRQAFFHAGAEYVL 829
           VLMD Q+P + G+E TR I+          HLP+V  A TA+ +   R+    AG +  +
Sbjct: 827 VLMDMQMPVMGGLEATRRIRAAEAARGDGQHLPIV--AMTANAMAGDRELCLEAGMDGYV 884

Query: 830 VKPLKEQTLHKAL 842
            KPL+      A+
Sbjct: 885 SKPLRRDEFFSAM 897