Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  235 bits (600), Expect = 7e-66
 Identities = 146/395 (36%), Positives = 220/395 (55%), Gaps = 17/395 (4%)

Query: 454 QDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDE 513
           +D+T    AE + + AR +AE + R ++EFLA MSHE+RTP  G+LGV  LL  TPLN++
Sbjct: 328 EDVTERKAAESELRHAREKAEAANRAKSEFLANMSHEIRTPFTGILGVLDLLLHTPLNEK 387

Query: 514 QREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEK 573
           Q  ++ +   S + LLA+LNDILD S++E GK  I   E  L  L+  +  +      +K
Sbjct: 388 QERYIRLAYGSTKQLLAILNDILDISKIEAGKLVIHPEEVDLVLLLGELTEVQAAAAAQK 447

Query: 574 GLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQ-LV 632
           GLE   +        +  D +R+ QI+ NLLNNAIKFT+ G + ++++     P  Q L 
Sbjct: 448 GLEFRYHIKGIIPPKIHGDPVRLRQIMANLLNNAIKFTNSGWVELDIECTRIAPGRQHLR 507

Query: 633 IQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEY 692
           ++V D+GIG+  +    IF+ F QA+S+TTR +GG+GLGLTI   LVE++ G + VSS  
Sbjct: 508 VEVRDSGIGVPPELQETIFDKFTQADSSTTRLFGGTGLGLTICKQLVELMHGSIGVSSNS 567

Query: 693 GIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTN-----AFIAQA 747
           G G+ F   + +   +   +P  +LPA  P     +  R+LLV+D   N      ++AQA
Sbjct: 568 GEGSCFWFDIELPESDPTVSPVPVLPAGSPITALPRDTRILLVDDTEANREVLAEYLAQA 627

Query: 748 FCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIK----KVLHLPV 803
            C+     V    +GL+A+   +    D +LMD Q+  +DG E TR I+    +    P+
Sbjct: 628 HCQ-----VRQAANGLEAVTLAESWQPDAILMDCQMAGMDGYEATRQIRIQEGQRRRTPI 682

Query: 804 VVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTL 838
           +  A TA  +   R+    AG +  L KP+  QTL
Sbjct: 683 I--ALTAFVMRGDREKCLAAGMDDYLPKPVDAQTL 715



 Score = 57.0 bits (136), Expect = 5e-12
 Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 1/109 (0%)

Query: 731 RVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVE 790
           R+LLV+DN      +       G  V   + G +A++     D+DLVLMD ++P LDG  
Sbjct: 739 RILLVDDNPEIREASTCLLEALGCQVQSASSGEEALQLGPEADFDLVLMDCRMPGLDGCA 798

Query: 791 TTRTIK-KVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTL 838
           TTR  + +    P  + A TA   +E+R     AG    L KP  EQ L
Sbjct: 799 TTRAWRARERGTPTAIIALTAGDPDESRAQCREAGMNDFLAKPFSEQEL 847