Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1279 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  220 bits (560), Expect = 5e-61
 Identities = 137/397 (34%), Positives = 218/397 (54%), Gaps = 18/397 (4%)

Query: 469 ARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHL 528
           A+  AE +A+ +A+FLA MSHE+RTP+N V+G++ L  +T L++ QRE++  +  S +HL
Sbjct: 525 AKALAEAAAQAKADFLANMSHEIRTPMNAVIGMTHLALKTDLDERQREYLRKIQHSSQHL 584

Query: 529 LAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAI 588
           L ++NDILDFS+ E GK  I++ +F L++++  +  +       KGLE V+         
Sbjct: 585 LGIINDILDFSKSEAGKLHIEQIDFDLEKVLEDVSSLMSERATSKGLEFVIEMADEVPRH 644

Query: 589 VRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLV-IQVVDTGIGIREQDL 647
           +  D +RI Q+L N  +NA+KFT +G + + + L E      L+   V DTGIGI+  +L
Sbjct: 645 LVGDPLRIGQVLINYASNAVKFTERGEVAIHVGLEEDQGQEVLLRFAVHDTGIGIKAGEL 704

Query: 648 TVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELV 707
             +F  F QA+S+TTR+YGG+GLGL I   L E++ GQ+   SE G G+ F       L 
Sbjct: 705 PTLFNSFQQADSSTTRKYGGTGLGLVIAKRLAELMGGQVGAESEPGRGSTF--WFTARLG 762

Query: 708 EKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIE 767
              +A  +  P PD      +T R+L+V+D+     +     R     VS    G + + 
Sbjct: 763 RSSNARHRAPPRPDL-----RTRRLLVVDDHDHARDVVCDMLRSMSFQVSDTDSGNRCLA 817

Query: 768 ELKI-----HDYDLVLMDNQLPYLDGVETTRTIKKV-LHLPVVVYACTADGLEETRQAFF 821
           EL+        YD+V +D Q+P +DG+ T R I+++ L  P +V   TA G +E  ++  
Sbjct: 818 ELQRASAAGEPYDIVFLDWQMPEMDGLATAREIRRLELPQPPLVLMITAYGRDELARSAG 877

Query: 822 HA---GAEYVLVKPLK-EQTLHKALEHFKHHHGQKNA 854
            +   G E +L+KP+   Q  +  +    H  G  +A
Sbjct: 878 ESGLQGIEEILIKPVSPSQLFNTVMRILDHEDGPHSA 914



 Score = 77.0 bits (188), Expect = 7e-18
 Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 19/153 (12%)

Query: 705  ELVEKPDAPQQLL--------------PAPDPQPLFDKT----LRVLLVEDNHTNAFIAQ 746
            E++ KP +P QL                A DP+ L D      LRVLLVEDN  N  +A 
Sbjct: 886  EILIKPVSPSQLFNTVMRILDHEDGPHSAADPEALPDLAPLAGLRVLLVEDNQLNQEVAS 945

Query: 747  AFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLHLPVV-V 805
             F     + V    DG  A+E+++   YD++LMD Q+P +DG+  TR I++     V+ +
Sbjct: 946  EFLAGANMVVDVADDGASALEKVRQQRYDVILMDMQMPVMDGIAATREIRRQFPAAVLPI 1005

Query: 806  YACTADGLEETRQAFFHAGAEYVLVKPLKEQTL 838
             A TA+ +E+ R+    AG    + KP+  + L
Sbjct: 1006 LAMTANAMEQDRERCLAAGMNDHIAKPVDPRDL 1038