Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  214 bits (545), Expect = 3e-59
 Identities = 142/398 (35%), Positives = 218/398 (54%), Gaps = 19/398 (4%)

Query: 455 DITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQ 514
           DI+     E++ + AR  AEE+   ++ FLA MSHE+RTP+N ++G++ L  +T L  +Q
Sbjct: 554 DISERKLMEEELRRARATAEEATEAKSLFLANMSHEIRTPMNAIIGMAHLAMKTELTPKQ 613

Query: 515 REHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKG 574
           R++V  + ++   LL ++NDILDFS++E GK  ++   F L++++  +  +     NEKG
Sbjct: 614 RDYVGKIHNAAISLLGIINDILDFSKIEAGKLSLEYVPFSLEDVLDNVSGLLGLKANEKG 673

Query: 575 LELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIE--GDPLAQLV 632
           LEL+ N N  T A +  D +R+NQIL NL++NAIKFT +G I +  + ++  GD + +L 
Sbjct: 674 LELLFNVNAGTPAGLVGDPLRLNQILTNLVSNAIKFTERGQITLTTRPVDQAGDRV-KLQ 732

Query: 633 IQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEY 692
             + D GIG+  + L  +F+ F QA+ +TTR+YGG+GLGL+I   LVEM+ G +   S  
Sbjct: 733 FWIEDMGIGMSREQLLHLFQAFTQADGSTTRKYGGTGLGLSISRRLVEMMGGTIWADSTL 792

Query: 693 GIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKY 752
           G G+ F         E+   P+ L       P     LRVL+ +DN     I     R  
Sbjct: 793 GEGSTFCFTAWFGRAEELARPRTL-------PASLAGLRVLVADDNGAAREILGEALRHL 845

Query: 753 GLDVSWVTDGLQAIEELK-----IHDYDLVLMDNQLPYLDGVETTRTIKKVL---HLPVV 804
            L    V  G +A+ +L         Y ++ +D Q+P LDGV T   +++ L     P V
Sbjct: 846 DLRPDLVASGAEALAQLTEMQGGADPYRVLFLDWQMPDLDGVSTLHKLQQALPQAQWPRV 905

Query: 805 VYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKAL 842
           V   TA   EE R+   + G   +LVKP+   TL   L
Sbjct: 906 VMV-TAYDQEELRRQTENLGICGILVKPVSASTLFDVL 942



 Score = 74.3 bits (181), Expect = 4e-17
 Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 9/145 (6%)

Query: 704  IELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGL 763
            + LV+  +AP   L    PQ   D  +R+LL EDN  N  IA    +  G  V+   DGL
Sbjct: 943  VSLVDADNAPATPLHIAAPQTRIDG-MRILLAEDNEINQQIAVELLQSMGAQVTVAGDGL 1001

Query: 764  QAIEELK---IHDYDLVLMDNQLPYLDGVETTRTIK---KVLHLPVVVYACTADGLEETR 817
            QA+E L+      +DLVLMD Q+P+LDG + T  ++   +  HLP++  A TA  + E R
Sbjct: 1002 QAVELLERSPDDSFDLVLMDLQMPHLDGYDATERLRCQQRFAHLPIL--AMTAHAMPEER 1059

Query: 818  QAFFHAGAEYVLVKPLKEQTLHKAL 842
            +     G    L KP+    L   L
Sbjct: 1060 ERCLAIGMNDHLAKPIDPTALAATL 1084