Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1358 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  249 bits (637), Expect = 6e-70
 Identities = 161/439 (36%), Positives = 241/439 (54%), Gaps = 35/439 (7%)

Query: 431  RVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHE 490
            R+Y   ++PI  +G   +I   G DIT    AE +   AR  AE + + ++ FLA MSHE
Sbjct: 909  RIYAMTVNPI-ADGGYANIY--GMDITERKNAELELINAREVAETATKAKSAFLANMSHE 965

Query: 491  LRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQK 550
            LRTP+NGVLG+ QLL  TPL+ EQR +V V  ++G +L  +L D+LD +R+E G+  I++
Sbjct: 966  LRTPMNGVLGMLQLLDATPLDPEQRGYVQVAHAAGSNLTRLLGDLLDLARVESGRLTIRE 1025

Query: 551  NEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKF 610
              F    L   +  + RP  + KG+ L   ++    A++  D  RI Q+L N++ NA+KF
Sbjct: 1026 EPFDFNGLTQEVLAVLRPEADRKGIVLEAATDGMPGALL-GDPQRIRQMLLNIVGNAVKF 1084

Query: 611  THQGSIRVELQLI-------------EGDPLAQ--LVIQVVDTGIGIREQDLTVIFEPFM 655
            T +G +R+  +               +G+P  Q  L + V DTGIGI    L  IFEPF 
Sbjct: 1085 TDRGHVRLLARFEPSAGPSATAEPGGQGEPGGQGTLYLAVEDTGIGIPSDMLGNIFEPFT 1144

Query: 656  QAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQ 715
            Q E   +R +GG+GLGL+IV  +V+++ G++ ++SE G GT   ++LP+  +++      
Sbjct: 1145 QVEDAVSRRHGGAGLGLSIVRRIVDLMEGEVSMTSEEGRGTTVTLRLPVAAMDR------ 1198

Query: 716  LLPAPDP--QPLFDKTL---RVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELK 770
             LPA +P    L D  +   R+LLVED+H N         K G D   V DG  A++ L+
Sbjct: 1199 -LPAQEPTRNGLADPPVRQGRLLLVEDDHVNRLTVLWMLEKLGYDALAVGDGAAALQALR 1257

Query: 771  IHDYDLVLMDNQLPYLDGVETTRTIKKVLHLP----VVVYACTADGLEETRQAFFHAGAE 826
               +D VLMD Q+P +DG++ T  I+    LP    V V A TA  +E  R+    AG +
Sbjct: 1258 QGRFDAVLMDVQMPVMDGLQATAAIRNATDLPGGAEVPVIALTAYAMEGDRERLLAAGMD 1317

Query: 827  YVLVKPLKEQTLHKALEHF 845
              + KP+  Q L + L  F
Sbjct: 1318 DYVEKPVDVQALRRVLSRF 1336



 Score =  117 bits (294), Expect = 4e-30
 Identities = 116/406 (28%), Positives = 187/406 (46%), Gaps = 35/406 (8%)

Query: 452 QGQDITTIAEAEKQSQAAR-REAEESARVRAEFLAKMSHELRTPLNGVLG-VSQLLKRTP 509
           +  + T+   A     AAR   AEE   ++  F A +SHELRTPL  +LG + +LL  T 
Sbjct: 166 EADEATSRLRATNAELAARCARAEELDVLKTRFFANISHELRTPLTLLLGPLERLLAETS 225

Query: 510 LNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPL 569
            +DE R  +  +  +   L   ++D+LD SR++ G  + +  E  L  L       +  L
Sbjct: 226 EDDEHRHSLFTMLRNARLLHQHVDDMLDLSRVDAGAMQPRHAEADLSALTRTTCAYFDTL 285

Query: 570 CNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQG-SIRVELQLIEGDPL 628
             ++G+   V + +   A V +D+ R  +IL NLL+N+ KFT  G S+ V L+  +GD  
Sbjct: 286 AAQRGMHYGVQAPLRLDAQVDTDKYR--RILLNLLSNSFKFTPDGGSVSVTLER-QGD-- 340

Query: 629 AQLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHV 688
            + ++ V D G G+       +FE + Q+       +GGSGLGL IV    E+  G   V
Sbjct: 341 -EALLSVSDDGPGVPAHLRGAVFERYRQSGEGARGLHGGSGLGLAIVKEFAELHGGTTSV 399

Query: 689 SSEYGIGTRFEIQLPIELVEKPD-APQQLLP-----APDPQPLFDKTL------------ 730
                 G  F+++LP+      + AP + +      A DP  L    +            
Sbjct: 400 GQGAEGGALFQVRLPLAAPPGVEVAPAESVAGSGSFAGDPGWLASGHVPQYAPAAGRDGG 459

Query: 731 RVLLVEDNHTN-AFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDG- 788
            VL+VEDN    A+I       + + V++  DG + + +      DL++ D  +P +DG 
Sbjct: 460 LVLVVEDNRDMIAYIVDILRPHHQVAVAF--DGEEGLRKALDLRPDLIVCDVMMPRVDGQ 517

Query: 789 --VETTRTIKKVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKP 832
             VE  R    +  +PV++    AD  +E R    H   +  + KP
Sbjct: 518 RMVEQLRRYPGMADVPVLMLTAKAD--DELRVHLLHGAVQGYIQKP 561