Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  197 bits (501), Expect = 2e-54
 Identities = 132/422 (31%), Positives = 215/422 (50%), Gaps = 31/422 (7%)

Query: 459 IAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHV 518
           +A    + + AR EAE + R + +FLA +SHELRTPLNG++G+++LL       EQ E +
Sbjct: 162 VAVRTHELEQARVEAESANRAKTQFLANISHELRTPLNGIIGLTELLLAAGPAGEQEECL 221

Query: 519 AVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELV 578
            ++  +G  LL+++N++LD S +E G+  + +  F L+E V  + R+       K L L 
Sbjct: 222 GMVRQAGLDLLSIVNNLLDMSSIEAGRIALNEAPFNLRETVGDLVRVLDVQARWKNLTLA 281

Query: 579 VNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQL---------------- 622
            + +      +  D  R+ Q+L NL+ N IK+T  G + + ++L                
Sbjct: 282 CSVSPDVPDRLVGDAARLRQVLTNLVINGIKYTEVGGVSLSVELDGALPPVPGAGQGAHA 341

Query: 623 -IEGDPLAQLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEM 681
              G P+  L + V DTG+GI  +    IFEPF  AE+  T++YGG+GLGL I   +  M
Sbjct: 342 AHAGGPVG-LRVTVEDTGVGIASEKWERIFEPFTLAENFLTKKYGGAGLGLAISREIARM 400

Query: 682 LSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPL-----FDKTLRVLLVE 736
           + G + V S+ G G+ F + +   L E       + P P    L      ++ LR+++ E
Sbjct: 401 MGGDIAVRSQEGAGSTFVLTMRFALGE------SVAPRPRDASLPVIRGVNRRLRIMVAE 454

Query: 737 DNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIK 796
           D+  N  +A  F  + G DV  V+ G++ +  L+    DL+LMD Q+P +DG+ET R ++
Sbjct: 455 DDVINRKLALYFFERMGHDVITVSSGIEVLAGLEREACDLLLMDIQMPEMDGLETIRALR 514

Query: 797 KVLHLP--VVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKHHHGQKNA 854
               +P  V V A TA  +   R+ F   G +  + KP+    L   +E+     G  + 
Sbjct: 515 GRKGVPSRVPVIAMTAHAMAGDRERFLAEGMDGYVSKPVDFGCLVAEIENVLDARGLLDV 574

Query: 855 GL 856
            L
Sbjct: 575 SL 576



 Score = 32.3 bits (72), Expect = 8e-05
 Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 9/108 (8%)

Query: 732 VLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVET 791
           V++++D+        A+    G +V   TDG   +  ++    D VL+D ++P +DG++ 
Sbjct: 28  VVVIDDDTMVRRSITAYLEDLGYNVHEGTDGRTGLALVRSVQPDAVLVDLRMPGIDGLDV 87

Query: 792 TRTI-KKVLHLPVVVYACTA---DGLEETRQAFFHAGAEYVLVKPLKE 835
            R +  +   +P +V + T    D +E  R+     GA   ++KP+ +
Sbjct: 88  LRELATERPDMPTIVVSGTGVMQDAIEAVRR-----GAWDFILKPIMD 130