Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1626 a.a., putative PAS/PAC sensor protein (RefSeq) from Shewanella sp. ANA-3

 Score =  221 bits (563), Expect = 3e-61
 Identities = 141/411 (34%), Positives = 230/411 (55%), Gaps = 22/411 (5%)

Query: 443  EGQIISIITQGQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVS 502
            +G +I +I    DIT   + EK  + A++EA+ +   ++ FLA MSHE+RTP+N VLG+ 
Sbjct: 863  QGHVIRVIGINIDITAQRQLEKTLRNAKQEADTANAAKSAFLANMSHEIRTPMNAVLGML 922

Query: 503  QLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAI 562
            QL++ T L+ +Q+ +V    ++ + LL +LNDILDFS+++ GK ++  +   ++ L+  +
Sbjct: 923  QLMQYTALSVQQQGYVTKAQTAAKSLLGLLNDILDFSKIDAGKLKLDLHPCSIELLMRDL 982

Query: 563  DRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQL 622
              +         +E++ + +    A + +DQ+R+ QIL NL  NA+KFT  G + V L+ 
Sbjct: 983  AVVLSANHGNSDVEVMFDLDSALPAWLLADQLRLQQILINLAGNALKFTPHGQVIVGLEC 1042

Query: 623  IEGDPLAQLV-IQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEM 681
            +  +  +  V   +VD+GIGI E+ +  IF  F QAES+T+R +GG+GLGL I   LVE+
Sbjct: 1043 LRHEAESVTVQFSIVDSGIGISEEQIERIFTGFEQAESSTSRRFGGTGLGLAISKRLVEL 1102

Query: 682  LSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTN 741
            + GQL V+S+ G+G+RF   L   ++E    P+  L             R+L+V+DN   
Sbjct: 1103 MGGQLQVTSKVGVGSRFWFDLTFPVMEVEANPRADLSG----------YRILVVDDNQIT 1152

Query: 742  AFIAQAFCRKYGLDVSWVTDGLQAIEELK-----IHDYDLVLMDNQLPYLDGVETTRTIK 796
              I       YG  V   + G QAIE++K        +D+VLMD ++P +DG++T   +K
Sbjct: 1153 TEILSKILSDYGCVVETASGGYQAIEKVKQATANAQQFDVVLMDWRMPDIDGLQTAEMLK 1212

Query: 797  KV---LHLPVVVYACTADGLEETRQAFFHAGAEYV--LVKPLKEQTLHKAL 842
                  + P+VV   TA G E   ++       +V  L KP+  Q L +A+
Sbjct: 1213 NAGTGSYTPLVV-MLTAYGHEVIAESQHINNVPFVNFLTKPVTSQILAEAV 1262



 Score = 49.3 bits (116), Expect = 2e-09
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 718  PAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHD--YD 775
            P P  Q L    L +L+VEDN  N  +        G  V     G++ + ++      +D
Sbjct: 1275 PKPRSQRLL-AGLTLLVVEDNQLNREVIDELLTYEGATVVLAEGGIEGVTQVLDSGDMFD 1333

Query: 776  LVLMDNQLPYLDGVETTRTIK---KVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKP 832
             V+MD Q+P +DG+E TR I+   +   LP++  A TA+  +  +Q    AG    + KP
Sbjct: 1334 AVIMDMQMPDIDGLEATRRIRADGRFDQLPIL--AMTANASQADKQECLEAGMNAHVSKP 1391

Query: 833  LKEQTL 838
            +  Q L
Sbjct: 1392 IDMQQL 1397