Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  206 bits (523), Expect = 1e-56
 Identities = 120/357 (33%), Positives = 200/357 (56%), Gaps = 16/357 (4%)

Query: 445  QIISIITQGQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQL 504
            Q  S +    D+T +     +   A+ EA+ +++ + +FLA MSHE+RTP+N ++G+SQL
Sbjct: 1005 QFESAVVSMVDMTELKLLSDELLVAKEEADAASKAKGDFLANMSHEIRTPMNAIIGMSQL 1064

Query: 505  LKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDR 564
              +T L+ +Q+ +V  +  + + LL+++NDILDFS++E GK  I+   F+L  ++  +  
Sbjct: 1065 CLQTALDKKQKNYVEKIERASKSLLSIINDILDFSKIEAGKLDIESVPFQLDTMLEDLSD 1124

Query: 565  IYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIE 624
            ++      K LEL+          +  D +R+ Q+L NL+NNAIKFT +G + + L L+E
Sbjct: 1125 MFSEKAAHKQLELLFAVAPNVPRHLFGDSLRLGQVLINLMNNAIKFTERGEVLLSLNLVE 1184

Query: 625  --GDPLAQLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEML 682
               D +  L   V D+GIG+       +F+ F QA+++TTR+YGG+GLGL I   LVE++
Sbjct: 1185 QQNDDVV-LRFSVRDSGIGLTADQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELM 1243

Query: 683  SGQLHVSSEYGIGTR--FEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHT 740
             G + V S++G G+   F ++L I   +K    Q+L   P           +L+ +DN T
Sbjct: 1244 GGTIGVESQFGHGSTFYFTVKLQISSGQKLTVAQELEGMP-----------ILVADDNAT 1292

Query: 741  NAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKK 797
               I +      G  V  V  G +A+      +Y + L+D ++P LDG+ET + IK+
Sbjct: 1293 ARDIMRTTLESMGFRVDTVRSGEEAVTRCIQQEYAVALIDWKMPNLDGIETAKQIKQ 1349



 Score = 75.5 bits (184), Expect = 3e-17
 Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 13/144 (9%)

Query: 702  LPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTD 761
            LP+    +   P+ LLP         K  R+LLVEDN  N  +A  F  + G+ +S  T+
Sbjct: 1404 LPVRRQSESIDPKLLLPL--------KGKRILLVEDNEMNLEVATEFLEQVGIILSIATN 1455

Query: 762  GLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKK---VLHLPVVVYACTADGLEETRQ 818
            G  A+++L+   +DLVLMD Q+P +DG + T+ ++K   +  LPVV  A TA+ +   ++
Sbjct: 1456 GQIALDKLEQQSFDLVLMDCQMPVMDGYQATQALRKRPELTELPVV--AMTANAMAGDKE 1513

Query: 819  AFFHAGAEYVLVKPLKEQTLHKAL 842
                AG    + KP++   L++ L
Sbjct: 1514 MCLRAGMNDHIAKPIEVNLLYQTL 1537