Pairwise Alignments

Query, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

Subject, 1236 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  226 bits (577), Expect = 5e-63
 Identities = 146/441 (33%), Positives = 236/441 (53%), Gaps = 34/441 (7%)

Query: 420  NPSDVTTEVDGRV------YRWNLSPIMVEGQIISIITQGQ---------DITTIAEAEK 464
            NP D   E++ R+      Y W LS     G+++     GQ         DIT     E 
Sbjct: 652  NPVDAY-EIEFRILGKNGSYHWVLS----RGRVVEFTADGQPKRMVGTHKDITRHKSNEV 706

Query: 465  QSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSS 524
                A+++AE +   ++EFLA MSHE+RTP+N ++G+ QL +RT L  +Q++++     S
Sbjct: 707  ALLEAKQDAELANLYKSEFLANMSHEIRTPMNAIIGMLQLAQRTSLTAQQKDYLEKAGFS 766

Query: 525  GEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNIT 584
             + LL ++NDILDFS++E GK  +++  F L +++     +      E+G+EL++ + +T
Sbjct: 767  AQSLLRIINDILDFSKIEAGKLELERVPFPLDKVLDHALDLNALKAQEQGVELLLYAPVT 826

Query: 585  TAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLI-EGDPLAQLVIQVVDTGIGIR 643
               I++ D +R+ Q+L NLL+NA+KFT  G I +  + + E D    L   V DTGIGI 
Sbjct: 827  AGLILKGDPLRLGQVLINLLSNAVKFTQSGEIELGCEDVGERDHRITLKFWVRDTGIGIS 886

Query: 644  EQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLP 703
            +     +F+ F QA+ +TTR+YGG+GLGL+I   LV M+ G++ V SE G+G+ F   + 
Sbjct: 887  KDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQVQSELGVGSTFSFTIS 946

Query: 704  IELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGL 763
             E+ E+     ++ P   P+ L    LR L+V+DN T   I  A  R +  +V     G 
Sbjct: 947  FEIAEE----AKVEPLVVPEKL--NNLRTLVVDDNPTALQIYSALMRDFHFEVDTAASGA 1000

Query: 764  QAIEELKIHDYDLVLMDNQLPYLDG------VETTRTIKKVLHLPVVVYACTADGLEETR 817
            +A+ +L     DL+L+D  +P +DG      ++T     ++   P+++   TA   E  +
Sbjct: 1001 EALYKLSRDPIDLLLLDWMMPEMDGGDVISAIDTMVAEGRIAKRPIII-MMTAYAAEPLQ 1059

Query: 818  QAFFHAGAEYVLVKPLKEQTL 838
                 A    VL KP K  +L
Sbjct: 1060 HEVDSANVFAVLQKPFKASSL 1080



 Score = 59.3 bits (142), Expect = 1e-12
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 1/118 (0%)

Query: 732  VLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVET 791
            VLLVEDN  N  +A    +  G +V    +G  A++ +    +D VLMD Q+P +DG+  
Sbjct: 1114 VLLVEDNFINQQVATELLKSAGYEVVVAGNGQIALDIIDSRPFDAVLMDIQMPVMDGLTA 1173

Query: 792  TRTIKKVLHLPVV-VYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKHH 848
             R +++     V+ + A TA  +   R+    AG    + KP+    L + L H+  H
Sbjct: 1174 ARALRERFSADVLPIIAMTAHAMSGDREKSLAAGMNAHITKPIVLTELFETLSHWIKH 1231