Pairwise Alignments

Query, 484 a.a., cobyric acid synthase CobQ from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., cobyric acid synthase (RefSeq) from Shewanella loihica PV-4

 Score =  570 bits (1469), Expect = e-167
 Identities = 296/489 (60%), Positives = 354/489 (72%), Gaps = 13/489 (2%)

Query: 5   LMVQGTTSDAGKSVLVAGLCRVLARRGIQVCPFKPQNMALNSAVTPDGGEIGRAQAVQAQ 64
           LMVQGTTSDAGKS LVAGLCR  AR G +V PFKPQNMALNSAVT DGGEIGRAQA+QA+
Sbjct: 30  LMVQGTTSDAGKSTLVAGLCRYFAREGRRVAPFKPQNMALNSAVTLDGGEIGRAQALQAE 89

Query: 65  ACGIAPSVHMNPVLLKPNSDTGAQVILQGRALSNMEANAY-----HDYKKVAMDTVMDSF 119
           AC +AP    NP+LLKPNSDT +QVI+QG+ALS+MEA  Y       Y+  AM  V+DS 
Sbjct: 90  ACYLAPHTDFNPILLKPNSDTSSQVIVQGKALSHMEAQTYFGKDSQGYRTKAMAAVLDSL 149

Query: 120 QRLQQEYEAIMIEGAGSPAEINLRENDIANMGFAEKADVPVIIVADIDRGGVFAHLYGTL 179
            RL+Q+YE I++EGAGSPAEINLRE DIANMGFAE  D PVI++ADID+GGVFAH+ GTL
Sbjct: 150 SRLEQQYELILVEGAGSPAEINLREGDIANMGFAEAVDCPVILIADIDKGGVFAHIVGTL 209

Query: 180 ALLSESEQARVKGFVINRFRGDIGLLQSGLDWLEQKTGKPVIGVLPYLHGFDLEAEDAIA 239
           ALLS SEQARVKG VINRFRGDI LL+ GLDWLE    KPV+GVLPYL+   LEAEDA+ 
Sbjct: 210 ALLSASEQARVKGVVINRFRGDISLLKPGLDWLEASIDKPVLGVLPYLNDLHLEAEDALD 269

Query: 240 AQQNLSADRQLRVAVPVFTRISNHTDFDPLRLNPNIDFRYVGQGESLSG----ADLIILP 295
           A+Q  S + + RV V VF RISNHTDFDPLRL+P+IDFRY    E+  G    ADLIILP
Sbjct: 270 ARQVSSGNTRFRVLVLVFPRISNHTDFDPLRLHPDIDFRYQQVNEAYDGQAIDADLIILP 329

Query: 296 GSKSTRADLAYLRSQGWDKEILRHLRLGGKVMGICGGFQMLGEWVHDPLGIEGEAGSSEG 355
           GSKS R DLA +  QGWD+ + RHLR GGKV+GICGG+QMLG  + DP G+EGEAG S+G
Sbjct: 330 GSKSVRQDLATMVEQGWDRALKRHLRYGGKVIGICGGYQMLGLAIEDPQGVEGEAGDSDG 389

Query: 356 LGLFAMQTELTAEKRLTNVKGHLTLDGQTVAAQGYEIHAGHSSWAADQKSPIILSDGS-- 413
           LGL  + TELT  KRL  VKG + L G++ +  GYEIH G S+  +    P+ L+     
Sbjct: 390 LGLLPIVTELTPNKRLAQVKGTIKLVGESASIAGYEIHCGRSTLLSKATKPLTLTSDEGN 449

Query: 414 --LDGLVSDCNQGFGTYLHGIFDRPETALRICQWAGAKEIEAYDHRAAQERAIDRIADAI 471
              +G +S   Q  G+YLHG+FD PE    +  WAG     A D  A ++  +DR+AD +
Sbjct: 450 QFNEGCLSHDGQILGSYLHGLFDSPEACALLLGWAGLSSAAAVDPDAIKQAQLDRLADTL 509

Query: 472 EQHLDLTLL 480
            +HLD+  L
Sbjct: 510 AEHLDMARL 518