Pairwise Alignments

Query, 484 a.a., cobyric acid synthase CobQ from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., cobyric acid synthase CobQ (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  578 bits (1489), Expect = e-169
 Identities = 301/500 (60%), Positives = 368/500 (73%), Gaps = 25/500 (5%)

Query: 6   MVQGTTSDAGKSVLVAGLCRVLARRGIQVCPFKPQNMALNSAVTPDGGEIGRAQAVQAQA 65
           MVQGTTSDAGKS LVAG+CR+LAR+G+ V PFKPQNMALNSAVT DGGEIGRAQA+QA A
Sbjct: 1   MVQGTTSDAGKSTLVAGICRLLARQGVNVAPFKPQNMALNSAVTVDGGEIGRAQALQAAA 60

Query: 66  CGIAPSVHMNPVLLKPNSDTGAQVILQGRALSNMEANAYH-----DYKKVAMDTVMDSFQ 120
           C + P    NP+LLKP+SDTGAQ+I+QG+AL+ +EA+A+      DYK +A++ V+DSF+
Sbjct: 61  CYLVPHTDFNPILLKPSSDTGAQIIVQGKALTTLEASAFFGEKSKDYKAMALNAVLDSFE 120

Query: 121 RLQQEYEAIMIEGAGSPAEINLRENDIANMGFAEKADVPVIIVADIDRGGVFAHLYGTLA 180
           RL Q+Y  I++EGAGSPAEINLR  DIANMGFAE  D PVII+ADID+GGVFAHL GTLA
Sbjct: 121 RLGQQYHTIVVEGAGSPAEINLRAGDIANMGFAEAVDCPVIIIADIDKGGVFAHLVGTLA 180

Query: 181 LLSESEQARVKGFVINRFRGDIGLLQSGLDWLEQKTGKPVIGVLPYLHGFDLEAEDAIAA 240
           LLSESEQARVKGFVINRFRGDI LLQSG+DWLE  T KPV+GVLPYLH   L+AEDA+  
Sbjct: 181 LLSESEQARVKGFVINRFRGDISLLQSGIDWLEAYTQKPVLGVLPYLHDLHLDAEDALTD 240

Query: 241 QQNLSADRQLRVAVPVFTRISNHTDFDPLRLNPNIDFRYVG-QGESLS-----GADLIIL 294
                A    +V V V+ R SNHTD DPLRL+P+IDF YV  Q ++L+      ADL+IL
Sbjct: 241 SPTKQAKSCFKVRVLVYPRTSNHTDVDPLRLHPDIDFDYVSLQTQALAQTPEIAADLLIL 300

Query: 295 PGSKSTRADLAYLRSQGWDKEILRHLRLGGKVMGICGGFQMLGEWVHDPLGIEGEAGSSE 354
           PGSK+ RADLA+LR QGWDK+I +HLR GGKV+GICGG+QMLGE + DPL IE   G+S+
Sbjct: 301 PGSKNVRADLAFLREQGWDKQIAKHLRYGGKVLGICGGYQMLGERIADPLAIEDVFGTSQ 360

Query: 355 GLGLFAMQTELTAEKRLTNVKGHLTLDGQTVAAQGYEIHAGHSSWA----ADQKSPIIL- 409
           GLG   + TE  AEK+L  V G LTL GQTVA +GYEIH G S +     A + +P+ L 
Sbjct: 361 GLGYLPISTEFKAEKQLRCVAGELTLIGQTVAVKGYEIHCGESQYLTSSDAAKGAPLRLI 420

Query: 410 ---------SDGSLDGLVSDCNQGFGTYLHGIFDRPETALRICQWAGAKEIEAYDHRAAQ 460
                         DG +S+  Q  GTYLHG+FD P+    I +WAG ++ +A D  A +
Sbjct: 421 NELTCDEQAEKSFADGCLSEDGQVLGTYLHGLFDSPDACQLILRWAGLEDAQAIDINAIR 480

Query: 461 ERAIDRIADAIEQHLDLTLL 480
           E+ +DR+AD + +HLDL  L
Sbjct: 481 EQQLDRLADVLAEHLDLPQL 500