Pairwise Alignments

Query, 254 a.a., molybdate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., molybdenum ABC transporter, periplasmic molybdenum-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 56.2 bits (134), Expect = 6e-13
 Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 27/245 (11%)

Query: 26  LHIYAASSMTNAVNALVADYSQQHDVKLVTVYGGSSSLARQIEAGAPADLFISANEEWAN 85
           + + AA S+  A+N ++A Y  +    +V  Y  S  L ++I+ G   D+F SAN +   
Sbjct: 16  IELRAAGSLKAAMNDIIAAYQVKSQANVVAQYAPSGLLLKRIQEGERVDIFASANMKHPQ 75

Query: 86  YLVEKGLVKPNKVVTLAANSLVLIRPTAQPVASFELQDAAAWQTALA-DSRLAVAQVDAV 144
            LV+ G     KV   A N L  I     P+ S  L D     T LA  ++L  +   A 
Sbjct: 76  ALVDAG--AGEKVQMFARNQLCAIAQADVPLTSANLLD-----TLLAPQTKLGTSTPKAD 128

Query: 145 PAGMYAKQALQHAGVWPELESRLAQTNNVRLALA---------------LVERGESPLGI 189
           PAG YA      A         + +   ++L                  ++E  ++ + +
Sbjct: 129 PAGDYAWAVFAKAEAIKTNAKSILEAKALQLTGGPESAKPPKDRNPYGWVMENKQADVFL 188

Query: 190 VYKTDALLSDKVT---IVTAFSAQSHQPIRYPLAQLND-KAASAEWVAYLRSDAAQQILQ 245
            Y T+A+L+ K      + A   +      Y L  L D  +A+     ++ S   Q IL 
Sbjct: 189 TYCTNAVLAQKEVPSLKIVALPPELAVGADYGLLVLKDANSATTALAEFILSPEGQAILT 248

Query: 246 RFGFE 250
            +GF+
Sbjct: 249 GYGFQ 253