Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., Sensory box histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score =  143 bits (360), Expect = 1e-38
 Identities = 100/292 (34%), Positives = 155/292 (53%), Gaps = 31/292 (10%)

Query: 36  VLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFA 95
           V+ +    ++L+  +  ++QSEKM SVG LAAG+AHEINNP+G  L N+  +R    +  
Sbjct: 388 VIRIDDITQRLS-LEEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIR--RRLSP 444

Query: 96  QLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQ 155
           +L   +EQ+     G +  +   R+ Q  ++      +L  ++++ +   R   IVT + 
Sbjct: 445 ELPKNLEQA--ELLGIQLEEV-NRYLQGREIP----QLLDGIQQAGA---RAAKIVTHML 494

Query: 156 SVSHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVD-------RQLAENLPKIKGIAPE 208
           S S  S  + A C+L   I+ A+ I  N F   +  D       RQ   NL  + G A E
Sbjct: 495 SFSRRSTRQMAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQAITRQFDPNLGPVPGTANE 554

Query: 209 IQQVLMNMFINASHAC------DEHGELTITTDTLNEKGKAWVQVQIADNGHGISPEHLA 262
           ++QVL+N+  NA+ A        E G + + T         W ++Q+ DNG G+S     
Sbjct: 555 LEQVLLNLLKNAAQAIHQRQDDSEPGRIILRT----RLNPPWAEIQVEDNGIGMSENVRK 610

Query: 263 KIFDPFFTTKPVGVGTGLGLSIAFGIV-EKHQGKISVTSEVGQGTRFTLLFP 313
           + F+PFFTTK +G GTGLGLS+++ I+   H+G++ V S  GQGT FTL  P
Sbjct: 611 RTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSAPGQGTCFTLRLP 662