Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Signal transduction histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score =  211 bits (536), Expect = 4e-59
 Identities = 122/294 (41%), Positives = 178/294 (60%), Gaps = 7/294 (2%)

Query: 22  EKLLEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCL 81
           E L+E++++A       LQ  +++    + QL+QSEK+AS+GQLAAGVAHEINNPIGF  
Sbjct: 172 EDLVEQRTQAFKQASELLQMEIDERKMLETQLVQSEKLASLGQLAAGVAHEINNPIGFIS 231

Query: 82  SNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESA 141
           SNL  L  Y     ++      +  +    E      + ++Q +L F+ ED+  L++ES 
Sbjct: 232 SNLGALDGYFGKLQEMLSAYGSAEGAIASPELVVQLRKLREQVELDFLVEDIPLLIKESK 291

Query: 142 SGLHRVKDIVTSLQSVSH-SSDGRFAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLP 200
            G+ RV  IV  L+  S   S   +   NL   ++S L IV N+ KY   V ++    LP
Sbjct: 292 DGIGRVGQIVKDLKDFSRVDSSQEWQMANLQHGMDSTLNIVANEIKYKADVVKEYTP-LP 350

Query: 201 KIKGIAPEIQQVLMNMFINASHACD-EHGELTITTDTLNEKGKAWVQVQIADNGHGISPE 259
           +++ +  +I QV+MN+ +NA+ A   E G +T+     N  G+  V +++ADNG GI P+
Sbjct: 351 EVECLPSQINQVIMNLIVNAAQAIGPERGTITLR----NGVGEETVWIEVADNGSGIPPD 406

Query: 260 HLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLLFP 313
            L KIFDPFFTTKP+G GTGLGLS+++GIV+KH G+I+V SEVG GT F +  P
Sbjct: 407 TLQKIFDPFFTTKPIGQGTGLGLSLSYGIVKKHHGEITVRSEVGVGTTFRVELP 460