Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  107 bits (267), Expect = 8e-28
 Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 62/289 (21%)

Query: 44  EQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEV--FAQLADFV 101
           E+L+ A+  L QS+KM +VGQL  G+AH+ NN +     +L  L+       F +L  ++
Sbjct: 255 ERLSQAEEALRQSQKMEAVGQLTGGIAHDFNNLLTGITGSLELLKTRVSQGRFNELDRYL 314

Query: 102 EQSAP-SFEGSEFYQAWMRFKQQHDLAFVREDVLSLV---EE---SASGLHRVKDIVTSL 154
             +   S   +      + F ++  L     D+  LV   EE      G H   ++VTS+
Sbjct: 315 GAAQDASKRAASLTHRLLAFSRRQTLDPKPVDINRLVIGMEELIRRTVGPHITLEVVTSV 374

Query: 155 QSVSHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLM 214
                                     +W+ F     +D             AP+++  L+
Sbjct: 375 G-------------------------LWSTF-----ID-------------APQLENALL 391

Query: 215 NMFINASHACDEHGELTITTDT--LNEKGKA--------WVQVQIADNGHGISPEHLAKI 264
           N+ INA  A    G +TI T    ++E+G          ++ + ++D G G+SPE + ++
Sbjct: 392 NLCINARDAMPRGGRITIETANRWIDERGSQGRDLIPGQYLSLCVSDTGTGMSPEVINRV 451

Query: 265 FDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLLFP 313
           FDPFFTTKP+G GTGLGLS+ +G V +  G++ + SE GQGT   L  P
Sbjct: 452 FDPFFTTKPLGQGTGLGLSMVYGFVRQSGGQVRIYSEPGQGTNMCLYLP 500