Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1186 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  154 bits (388), Expect = 1e-41
 Identities = 99/279 (35%), Positives = 149/279 (53%), Gaps = 14/279 (5%)

Query: 42   TLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLN----TLRDYAEVFAQL 97
            +++ L  AQ + LQ+ ++ASVGQLAAG+AHEIN PI +   NL      L +   V A L
Sbjct: 910  SIDALKEAQREALQASRLASVGQLAAGIAHEINTPIQYIGDNLRFIEGALGELGGVLADL 969

Query: 98   ADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSV 157
                 +     E    + A        D+A++ E++     +S  G+  V  IV S++  
Sbjct: 970  RALAARGGLEAEADGCFAA-------KDIAYLMEELPLAATQSLQGVDHVAHIVRSMKEF 1022

Query: 158  SHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMF 217
            SH         ++N  I+S L +  N++K    V+  L ++LP I   A EI QVL+N+ 
Sbjct: 1023 SHPGTTAKVATDINRAIDSTLTVSRNEWKQLAQVETDLDDDLPLILCFAAEINQVLLNLI 1082

Query: 218  INASHACDE-HGELTITTDTLNEKGKA-WVQVQIADNGHGISPEHLAKIFDPFFTTKPVG 275
            +NA+HA +    E  + T  +  +G+A  ++++I D+G G+ P    KIFDPFFTTK VG
Sbjct: 1083 VNAAHAIETVRAEGQLGTIRIATRGEAECIEIRITDSGPGVPPAIRDKIFDPFFTTKSVG 1142

Query: 276  VGTGLGLSIAFG-IVEKHQGKISVTSEVGQGTRFTLLFP 313
             GTG GLSI    +V KH GK+ + + V  G  F +  P
Sbjct: 1143 KGTGQGLSICRDVVVTKHGGKMYLDTSVAPGACFVVRLP 1181