Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  131 bits (330), Expect = 4e-35
 Identities = 103/321 (32%), Positives = 158/321 (49%), Gaps = 38/321 (11%)

Query: 4   EAQYQRIYERERKARILAEKLLEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVG 63
           EA    ++E     R+L E +       + D+  EL + ++ L   QA+L++SEK+AS+G
Sbjct: 315 EAAEHTLFESRENYRLLYENV----ETLVRDRTAELAALVDTLTRTQAELVRSEKLASLG 370

Query: 64  QLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQ 123
            + A VAHE+N P+G  L    TL+D+   FA L                  A  R  +Q
Sbjct: 371 AMVAAVAHEVNTPVGNALVAATTLKDHTRAFATLT-----------------ASGRISRQ 413

Query: 124 HDLAFV--REDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNLNDCIESALRIV 181
              A+V   E+   L+  S     R+  + T  Q     ++ +     L+  I+  +  +
Sbjct: 414 AIAAYVATTEEACDLLVRSLEQAGRL--VGTFKQVAVDQTNDQRRSFLLDQTIQEVITAL 471

Query: 182 WNQFKY---TMLVDRQLAENLPKIKGIAPEIQQVLMNMFINA-SHACDEH--GELTITTD 235
              F+Y   T+ +D   A  +    G    + QV+ N+  NA  H  D+H  GE+ I T 
Sbjct: 472 KPSFRYRPITVSLDLAAAVTMDSFPG---SLAQVIGNLVTNAVVHGFDDHDSGEIRIITR 528

Query: 236 TLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEK-HQG 294
           ++  +    V + ++DNG GI+P  L KIFDPFFTT+    G+GLGL I +GIV K   G
Sbjct: 529 SVEAQS---VTIGVSDNGRGIAPAILPKIFDPFFTTRLGQGGSGLGLHIVYGIVTKILGG 585

Query: 295 KISVTSEVGQGTRFTLLFPAI 315
            ++V S  G+GTRFTL  P +
Sbjct: 586 GLTVDSVEGEGTRFTLTLPRV 606