Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., putative signal transduction histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  115 bits (287), Expect = 4e-30
 Identities = 90/317 (28%), Positives = 158/317 (49%), Gaps = 54/317 (17%)

Query: 9   RIYERERKARILAEKLLEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLAAG 68
           ++ +R++K R  A +L +   +    +  EL++  ++L     QL+ SEK+AS+G++ AG
Sbjct: 380 QVQDRDQKLRDWAGELNDRVDQ----RTAELRAANDKLEATYKQLVMSEKLASIGEITAG 435

Query: 69  VAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAF 128
           VAHEINNPI     N++ +R          + VE                      +LA 
Sbjct: 436 VAHEINNPIAVIQGNVDVMR---MTLGTATEDVET---------------------ELAL 471

Query: 129 VREDVLSLVEESASGLHRVKDIVTSLQSVSHSSD-GRFAECN-----LNDCIESALRIVW 182
           + + +L           R+  IV  L   +  ++ G F E       ++DC+     +V 
Sbjct: 472 IDDQIL-----------RISAIVGKLLQFARPTEFGTFEERLDLAPVVSDCLVLVDHVVT 520

Query: 183 NQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEHGELTITTDTLNEKGK 242
            Q    + V +Q +E  P ++    E+QQV++N+ +NA  A +  G+L +T   ++    
Sbjct: 521 KQ---DVAVIKQFSET-PAVRIDPGELQQVVINLILNAVQAMEGSGQLVLTLREMDRNDV 576

Query: 243 AWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSEV 302
           +   +++AD G GI+ + L  +F+PF+TTK +G GTGLGLSI+  ++++  G ISV + V
Sbjct: 577 SGACLEVADTGSGIAAKDLPSVFNPFYTTK-LGEGTGLGLSISQTLIQRAGGVISVENRV 635

Query: 303 GQ----GTRFTLLFPAI 315
                 G  F++  PA+
Sbjct: 636 EDGKIIGAVFSIWLPAV 652