Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (346), Expect = 6e-37
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 47/309 (15%)

Query: 10  IYERERKARILAEKL---LEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLA 66
           +  R  + +  AE+L   +EE++R+L +K  ELQ  +  LN  + QL+ +EK+ ++G+L 
Sbjct: 413 LQRRNSQIQAAAEQLEVKVEERTRSLQEKTEELQRNVALLNETRQQLVTNEKLTALGELT 472

Query: 67  AGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDL 126
           AG+AHEINNP    L N+  L+      ++L D  E                        
Sbjct: 473 AGIAHEINNPTAVILGNMELLK------SELGDKAED----------------------- 503

Query: 127 AFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAEC----NLNDCIESALRIVW 182
             V E++  ++E+    + R+  I+ SL  + +S  G F        L   +E    +V 
Sbjct: 504 --VEEEIDIVIEQ----VGRISTIIRSL--LQYSRPGEFNAPLEMHQLTPIVEEMAILVR 555

Query: 183 NQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEHGELTITTDTLNEKGK 242
           +  K   +V  Q       I+   P++ QVL+N+ +NA+HA D  G + I T    + G+
Sbjct: 556 HSIKKQEVVLIQDLNASYPIEVNRPQLLQVLINLVVNAAHAMDGQGRIWIRTYDWVQGGE 615

Query: 243 A-WVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSE 301
              V++++ D G GI  E L +IFDPF+TT+    GTGLGLS+++GI+++  G I V+S 
Sbjct: 616 PIGVKIEVEDEGKGIPEEQLGRIFDPFYTTRQ--DGTGLGLSLSYGIIKRIGGTIEVSST 673

Query: 302 VGQGTRFTL 310
           VG+GT FT+
Sbjct: 674 VGKGTLFTI 682