Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 654 a.a., histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (327), Expect = 9e-35
 Identities = 98/283 (34%), Positives = 154/283 (54%), Gaps = 21/283 (7%)

Query: 36  VLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFA 95
           V+ L+ + EQ    QA   ++ ++AS+G+L+AG+AHEINNP G  L  ++      +   
Sbjct: 388 VVLLEESTEQHKLRQANE-EASRLASLGELSAGIAHEINNPTGLILHAISLFSAAIKDLN 446

Query: 96  QLADFVEQSAPSFEGSEFYQ-AWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSL 154
             A++ +Q  P      F+Q A +   Q  +   V  D    +EE+A    R+  IV  L
Sbjct: 447 PAANYYQQQNP------FWQIAGLAPSQAMEEMAVSSDT---IEEAAK---RISRIVNDL 494

Query: 155 Q--SVSHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQV 212
           +  ++ + +      C LN+ +E ALR+  NQ K T  V + L    P+I G A ++ QV
Sbjct: 495 KRYALPNLTQDHTLVC-LNEVVEVALRLTANQTK-TRQVTKLLHLPSPRIMGDAQQLHQV 552

Query: 213 LMNMFINASHACDEHGELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTK 272
           L+N+  NA HAC  H E +I   T   +G+A ++V   DNG G+    L +I +PFFTT+
Sbjct: 553 LINLIQNACHACAAH-EGSIQISTQVSQGRALIKVN--DNGCGMDSATLKRITEPFFTTR 609

Query: 273 PVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLLFPAI 315
               G+GLGLS+   I+++HQG++ + S  G+GTR  L F  +
Sbjct: 610 RTEGGSGLGLSVCSRIIKEHQGQMQIHSAPGKGTRIQLSFALV 652