Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., histidine kinase,HAMP domain-containing protein,histidine kinase from Dechlorosoma suillum PS

 Score =  125 bits (314), Expect = 3e-33
 Identities = 91/302 (30%), Positives = 145/302 (48%), Gaps = 45/302 (14%)

Query: 18  RILAEKLLEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPI 77
           R+  ++  +E  R + ++   L+     L  AQ QL+ +EK+ ++G+L AGVAHEINNP+
Sbjct: 418 RLELQRSADELDRKVAERTAALEEANATLRRAQQQLVMNEKLTAIGELTAGVAHEINNPV 477

Query: 78  GFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLV 137
                NL  LRD            EQ+ P                      VR ++  + 
Sbjct: 478 AVIQGNLELLRDVLG---------EQAEP----------------------VRGEIRLID 506

Query: 138 EESASGLHRVKDIVTSLQSVSHSSD--GRFAECNLNDCIESALRIVWNQFKYTMLVDRQL 195
           E++     R++ IVT L   +   D  G     ++N  +   L +  +      +     
Sbjct: 507 EQT----QRIRAIVTRLLQFARPGDFAGYAEATDVNGVVADCLVLTRHNLNKAGVKVETR 562

Query: 196 AENLPKIKGIAPEIQQVLMNMFINASHACDEHGELTITTDTLN-------EKGKAWVQVQ 248
            E    ++    E+QQVL+N+ +NA  A  + G L++ +  +        E       ++
Sbjct: 563 LEACCNVEMNRGELQQVLINLMMNAMQAMPQGGTLSMESRDIGPGDAIPGEASFPGALLR 622

Query: 249 IADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRF 308
           + D GHGI+P  L +IFDPFFTTK    GTGLGLSI++ I++++ G+ISV S  G+ T F
Sbjct: 623 VRDTGHGIAPADLDRIFDPFFTTKKQE-GTGLGLSISYAIIQRYGGRISVESAPGEHTTF 681

Query: 309 TL 310
           TL
Sbjct: 682 TL 683