Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  219 bits (559), Expect = 2e-61
 Identities = 120/283 (42%), Positives = 177/283 (62%), Gaps = 6/283 (2%)

Query: 32  LYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYA 91
           L   + E ++  ++L  AQ+QLLQSEKMAS+GQLAAGVAHE+NNPIGF  SNL TL  Y 
Sbjct: 718 LQQALAEAKALNQRLAEAQSQLLQSEKMASIGQLAAGVAHEMNNPIGFVYSNLGTLDHYL 777

Query: 92  -EVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDI 150
            E+FA +A +    +         ++  + K + D  F+R D++ L+ ES  GL RV  I
Sbjct: 778 REIFAIIAAYEAADSGPCRDCRQLESARQLKLEKDFDFLRSDIVQLLAESRDGLERVAKI 837

Query: 151 VTSLQSVSHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQ 210
              L+  S + +      +L+  ++S L IVWN+ KY   V ++  E LP +     +I 
Sbjct: 838 ARDLKDFSRAGEAESQWADLHQGLDSTLNIVWNELKYKCTVHKEYGE-LPLVWCEPSQIN 896

Query: 211 QVLMNMFINASHACDEHGELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFT 270
           QV MN+ +NA+ A  + G++ + T    ++    V V ++D+G GI+PE+L ++F+PFFT
Sbjct: 897 QVFMNLLVNAAQAIPKKGDIWLRTGRRGDE----VFVAVSDSGCGIAPEYLHRLFEPFFT 952

Query: 271 TKPVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLLFP 313
           TKPVG GTGLGLS+A+ IV+KHQG++ V SE G+G+ FT+  P
Sbjct: 953 TKPVGKGTGLGLSLAYSIVQKHQGRLEVESEPGRGSTFTVWLP 995