Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 736 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  223 bits (569), Expect = 8e-63
 Identities = 135/325 (41%), Positives = 199/325 (61%), Gaps = 18/325 (5%)

Query: 2   SAEAQYQRIYERERKARILAEKLLEEKSRA-------LYDKVLELQSTLEQLNGAQAQLL 54
           +A  + + + ER      LA++ LEE  R        L  +  EL    ++L  AQ QL+
Sbjct: 407 NAHTKLEILVERRTAQLSLAKQALEEDVRRREASENELRQRNAELLEVNKRLQEAQEQLV 466

Query: 55  QSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSE-F 113
           QSEKMAS+GQLAAGVAHEINNPIG+  SNL+TL  Y E    + D +  +          
Sbjct: 467 QSEKMASIGQLAAGVAHEINNPIGYVQSNLSTLGRYLEDMQTVLDSLATAVAQLPSEHPA 526

Query: 114 YQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSVSH---SSDGRFAECNL 170
            QA  R KQ  D  F+ ED+ SLV +S  G+ RV+ IV  L+  S    S D ++A+  L
Sbjct: 527 AQAVARVKQDLDFDFLLEDLPSLVTQSRDGIDRVRKIVADLKDFSRLDASQDWQWAD--L 584

Query: 171 NDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEH--G 228
           +  ++S L IV N+ KY   V R+  + LP+++ +  ++ QV +N+ +N++HA  E   G
Sbjct: 585 HQGLDSTLNIVNNEIKYRAEVVREYGQ-LPEVECLPSQLNQVFLNLLVNSAHAMPEGQMG 643

Query: 229 ELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGI 288
            +T+ +       + W++V+  DNG GISPE++ ++FDPFFTTKPVG GTGLGLS+++GI
Sbjct: 644 RITLRSGHDEPAHQVWLEVE--DNGSGISPENMHRLFDPFFTTKPVGKGTGLGLSLSYGI 701

Query: 289 VEKHQGKISVTSEVGQGTRFTLLFP 313
           V+KH G+I+V+SE+G+GT F ++ P
Sbjct: 702 VQKHHGQITVSSELGKGTTFRIVLP 726