Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  162 bits (411), Expect = 1e-44
 Identities = 108/278 (38%), Positives = 151/278 (54%), Gaps = 12/278 (4%)

Query: 38  ELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQL 97
           EL+ T E L   Q QLL SEKMAS+G+L AGVAHE+NNPI F L N+  L+ YA    +L
Sbjct: 184 ELRQTHEDLKRTQQQLLHSEKMASLGRLVAGVAHELNNPISFVLGNVLALKRYA---GRL 240

Query: 98  ADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSV 157
             ++E  A    G +        + +  +  + ED+  L++    G  R +DIV  L+  
Sbjct: 241 ETYLE--AVHNRGCDCIPELEELRSELRIDRILEDMSPLIDGMIEGAERTRDIVDGLKRF 298

Query: 158 SHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMF 217
           S          NL + ++ A+R V      +  V  +L   LP ++G   ++QQV+MN+ 
Sbjct: 299 SALDREAAERFNLAEVVQRAVRWVAKSAPPSFTVRTELPAELP-LRGSPGQLQQVVMNLV 357

Query: 218 INA--SHACDEHGELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVG 275
            NA  + A    GEL I+     E G   +++   DNG GI  E L  +FDPFFTTKPVG
Sbjct: 358 QNALQATAAQPGGELLIS----GELGDRELRLIFHDNGPGIPDEALGHLFDPFFTTKPVG 413

Query: 276 VGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLLFP 313
            GTGLGLSI++GIVE+H G+I  ++    G  F L  P
Sbjct: 414 EGTGLGLSISYGIVERHGGRIVASNHPEGGAVFRLTLP 451