Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  113 bits (283), Expect = 8e-30
 Identities = 78/252 (30%), Positives = 131/252 (51%), Gaps = 49/252 (19%)

Query: 55  QSEKMASVGQLAAGVAHEINNPIG---FCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGS 111
           Q+EK+AS+GQLA+GVAHEINNP+G    C  NL             A  +++ A      
Sbjct: 263 QAEKLASIGQLASGVAHEINNPLGGVILCFRNLT------------AGGMDEDA------ 304

Query: 112 EFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNLN 171
                    ++QH+          ++++   GL +++ IV  L   +  S    +E  + 
Sbjct: 305 ---------RRQHE---------KVIDD---GLEKIRRIVGELMHYARPSPLAVSETRIE 343

Query: 172 DCIESALRIV--WNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEHGE 229
           D   S+  +V    Q K   LV   +A+++P +     ++ QV++N+ +N + A    G 
Sbjct: 344 DLFASSRALVEFTLQRKGVALVSH-VAQDVPPLFIDPDKMGQVILNLVLNGADAMPAGGT 402

Query: 230 LTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIV 289
           LT+    +  +    V++ ++D G G++PEH  +IFDPFFTTKP G GTGLGL+++  IV
Sbjct: 403 LTLDARIVENE----VRITVSDTGPGVAPEHRERIFDPFFTTKPSGSGTGLGLAVSTAIV 458

Query: 290 EKHQGKISVTSE 301
            +H G +++  +
Sbjct: 459 SRHGGTLTLAPQ 470