Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  111 bits (277), Expect = 6e-29
 Identities = 83/272 (30%), Positives = 126/272 (46%), Gaps = 44/272 (16%)

Query: 51  AQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEG 110
           AQ++Q+ KM S+G+++AGVAHE+N P       LN +R                     G
Sbjct: 422 AQIVQAAKMKSLGEMSAGVAHELNQP-------LNAIR--------------------MG 454

Query: 111 SEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNL 170
           S++    +    +  L    E +  +  +    + R  +I+ +L+S    S+      NL
Sbjct: 455 SDY----LNMALEQGLPVPPEQLREVTLDICGQVDRATEIINTLRSFGRKSEILEEPVNL 510

Query: 171 NDCIESALRIVWNQFKYTML-VDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEH-- 227
           N  + S L +V +QF    +  +  L + LP +K     +QQV+ N+  NA  A  E   
Sbjct: 511 NAPVRSVLLLVEHQFLLQNVEFELHLGDALPPVKAHNNRLQQVVFNIITNARDAVIERMR 570

Query: 228 ------GELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLG 281
                 G +TITT    +     V + + DNG GI      ++F PFFTTK  G G GLG
Sbjct: 571 RDAGLRGRITITTSHEGDT----VTLSVKDNGCGIPATLREQVFQPFFTTKATGQGMGLG 626

Query: 282 LSIAFGIVEKHQGKISVTSEVGQGTRFTLLFP 313
           L+I +GIV  + G I +      GT F+L FP
Sbjct: 627 LAIVYGIVRSYGGDIRIDGVPTGGTEFSLTFP 658