Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 719 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  109 bits (272), Expect = 2e-28
 Identities = 88/278 (31%), Positives = 127/278 (45%), Gaps = 35/278 (12%)

Query: 53  LLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAE--VFAQLADFVEQSAPSFEG 110
           LLQSEKM S+G LAAG+AHE+NNP+G  L     ++   +  + A  A   E   P    
Sbjct: 450 LLQSEKMLSIGGLAAGMAHEMNNPLGAILQGAQNIQRRLDPALPANRAAAEEAHCP---- 505

Query: 111 SEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNL 170
            +  Q++M          V   +   ++   +   R   +V  +      S G      L
Sbjct: 506 LDAMQSYM----------VARGIPGFLDGIQNAGARAASLVAHMLEFIRPSQGERTAIGL 555

Query: 171 NDCIESALRIVWNQFKYTMLVD-------RQLAENLPKIKGIAPEIQQVLMNMFINASHA 223
              I+ AL +  N +   M  D       R        I  I  E++QV +N+F NA+ A
Sbjct: 556 TTIIDRALALAGNDYSDNMNHDFRTLGIVRDYDPTDDIISCIPAELEQVFLNLFRNAAQA 615

Query: 224 CDE-------HGELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGV 276
             +         EL I T  L  +    V+V + DNG GISP    +IF+PFF+T+  G 
Sbjct: 616 MRDKTYPEGISPELHIVTRVLPSE----VRVDVIDNGPGISPAVRKRIFEPFFSTRDAGK 671

Query: 277 GTGLGLSIAFGIV-EKHQGKISVTSEVGQGTRFTLLFP 313
           G G+GL+IA+ I+   H G I   S  G+GTR T+  P
Sbjct: 672 GVGMGLAIAYFIITTNHGGTIECASRPGEGTRLTIRLP 709