Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  133 bits (334), Expect = 1e-35
 Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 35/266 (13%)

Query: 51  AQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEG 110
           A+ LQS KMA++G+LAAGVAHE+NNP+     N   ++D           VE+   +   
Sbjct: 316 AEFLQSSKMAALGKLAAGVAHEVNNPLMLIRENAGWIKDL---------LVEEDPAAM-- 364

Query: 111 SEFYQAWMRFKQQHDLAFVREDVLSLVEESASGL-HRVKDIVTSLQSVSHSSDGRFAECN 169
                      + H       D + +  + A G+ HR+  +   L+ +         +  
Sbjct: 365 -----------RNHKELVTAADKIEMHVDRAKGVTHRMLGLARRLEPLQD-------DVC 406

Query: 170 LNDCIESALRIVWNQ--FKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEH 227
           +N   E  ++ +  +   ++  LV ++LA++LP I   A ++QQVL+N+  NA  A    
Sbjct: 407 VNLLTEQTIKFLETEALHRHITLV-KELADDLPPITTDATQVQQVLLNILDNAIDAVGRD 465

Query: 228 GELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFG 287
           G +TI T    ++ + +V V  +D G GI PE L++IFDPF+TTK VG GTGLGL+I   
Sbjct: 466 GTITIRTGAAPDRSEVFVSV--SDTGEGIPPELLSRIFDPFYTTKKVGEGTGLGLAICHS 523

Query: 288 IVEKHQGKISVTSEVGQGTRFTLLFP 313
           I+EK  G+I   S  GQG  FT+  P
Sbjct: 524 ILEKLGGRIHAASAPGQGATFTVTLP 549