Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  109 bits (272), Expect = 2e-28
 Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 45/304 (14%)

Query: 13  RERKARILAEKLLEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHE 72
           R R  R+    + ++  R     ++E++  +      + +L QSEK+A++G+LA  +AHE
Sbjct: 225 RVRYFRVYTYPVQDQNGRLT--SIIEMRRDITNRTNMELRLQQSEKLAAIGELATYIAHE 282

Query: 73  INNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVRED 132
           I NP+                              F    F  + +R     + A  R  
Sbjct: 283 IRNPL------------------------------FAIGGFANSLLRLPTLDETA--RGK 310

Query: 133 VLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVD 192
           V  ++EES     R+ +I+ S+ + +  +  +  + +LN  +   L ++   F    +  
Sbjct: 311 VQVILEES----RRLDNILRSILNFARPTTSKAGKADLNGVVRQTLELMAFGFDTRRITS 366

Query: 193 R-QLAENLPKIKGIAPEIQQVLMNMFINASHACDEHGELTITTDTLNEKGKAWVQVQIAD 251
              LA +LP+++G A  I+Q L+N+  NA  A    G LT+ T   +      V V + D
Sbjct: 367 ELALAADLPRVRGDAELIKQCLINLVKNAQEAMPGGGVLTVRTGMTHSH----VFVTVED 422

Query: 252 NGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLL 311
           +G GI  E   +IF PFF+TK  G G  +GL++   IVE   GK+ + S VG+GTR TL 
Sbjct: 423 SGEGIPAEMHERIFSPFFSTKEKGAG--IGLAMTRKIVEDMGGKVDLVSHVGKGTRITLF 480

Query: 312 FPAI 315
            P +
Sbjct: 481 LPPV 484