Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., sensor histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  104 bits (259), Expect = 4e-27
 Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 32/258 (12%)

Query: 51  AQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEG 110
           A+++++ K+AS+G++A GVAHEINNP+    +    + D  E            A     
Sbjct: 126 ARMIEAGKLASMGRMAEGVAHEINNPVNIIANAAGWIEDLLEE--------PDIASGPHV 177

Query: 111 SEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNL 170
           +E  +   + KQQ                   G+ RV++I   L       D R      
Sbjct: 178 AEMRRTLAKIKQQ-------------------GV-RVREITRKLLCFGRGLDPRPQPVAC 217

Query: 171 NDCIESALRIVWNQFKYTML-VDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEHG- 228
              +   L++V ++ +   + V   L E LP+I     E++QV +++  NA  A +E+G 
Sbjct: 218 ATLLRETLQLVASRCEALAVDVVVDLPEGLPEIMAPPVELRQVFLHVIENALDAMEENGG 277

Query: 229 ELTITTDTLNEKGKAW--VQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAF 286
            LT+    ++ + +    + V I D GHGI+P  L ++FDPFF+T+ VG G GLGLS+++
Sbjct: 278 TLTVRLRLMHGQDEEHDALHVAITDTGHGIAPALLPRVFDPFFSTRSVGRGMGLGLSVSY 337

Query: 287 GIVEKHQGKISVTSEVGQ 304
           G+V    G I++TS+ G+
Sbjct: 338 GVVRALGGDINLTSDPGR 355